Gossypium hirsutum (upland cotton): 107888579
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Entry
107888579 CDS
T04793
Name
(RefSeq) KH domain-containing protein HEN4 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107888579
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
107888579
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
Dsl1_N
Motif
Other DBs
NCBI-GeneID:
107888579
NCBI-ProteinID:
XP_016668232
UniProt:
A0A1U8HQB2
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Position
A09:complement(3329062..3333859)
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AA seq
538 aa
AA seq
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MAGQRNSYGKRAHSHSGYSENGSNKRRNAGDDREQFVIDSDDTVYRYLCPARKIGSIIGR
GGEIVKQLRAETKSKIRIGETIPGSDERVVTIYSSRDERNALEDGDAFVSPAQDALFRVH
EKVVADDLHSDDESEGHQSTARLLVSSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDLP
SCALSTDELVQISGEAAVVKKALHQIASRLHENPSRSQHLLASAVSNAYPAAGAMLGPAA
GAQIVGITSLVGPYGRYKGDTGEWPRSMYSAPRDEMSSKEFSLRLVCPTANIGGVIGKGG
AIINQIRQESGAAIKVDSSTTDGDDCLITISAKEFFEDTYSPAIEAAARLQPRCSEKVER
DSGIVSFTTRLLVPTSRIGCLIGKGGAIVTEMRRITKANIRILSKENLPKIASEDDEMVQ
IAGDLDVAKDALVQITTRLRANLFDREGAVNALVPVLPYLHVPTEGTDSLSYESREGKRH
GRVHSFSGGYGSSDLAASDGYGSYGGLQIGSTTGAYGAYSSGRGGPSGLSSHTSVSRR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcagaggaatagctatgggaagcgggctcattctcactctggctattctgag
aatggatcaaataagaggagaaatgcaggtgatgacagggaacaatttgttattgattca
gacgataccgtatataggtatttgtgccctgcaagaaagataggaagcattattggaagg
ggaggggagattgttaagcaattaagagcagaaactaaatcaaaaattagaattggtgaa
acaattcctggttctgatgagcgcgtggttactatctatagctctagagatgagagaaat
gcccttgaagatggggatgcttttgtttctcctgctcaagatgctctattcagggtgcat
gaaaaagttgttgcagacgatttgcacagtgatgatgaatctgaaggccaccaaagtact
gctcggcttcttgtatcttctgatcagattggatgtgttataggaaagggtggacagatc
gttcagaacatacgtagtgaaactggtgctcagattcgcattcttaaggacgatttacct
tcttgtgccttgtccacagatgaacttgtacagatatctggggaagctgcagttgtgaag
aaggctctgcatcaaattgcatctcgccttcatgagaacccttcacgatctcagcacttg
cttgcttctgctgtgtcaaatgcatatcctgctgctggtgcaatgcttggtccagctgct
ggtgcccagatcgtagggataacttcattggttggaccttatggacgatacaaaggtgac
actggagaatggccacgctctatgtactcggctccaagggatgagatgtcatcaaaagaa
ttttctcttcgtttggtttgtccaactgctaatattggaggagtgattggcaaaggtggt
gctataatcaaccagatcaggcaggaatcaggtgcagccatcaaagtagatagctcaact
acagatggagatgattgcttaataactatatcagctaaggagttctttgaggatacatat
tcacctgctatcgaagctgctgcacgtttgcaacctagatgcagtgagaaggttgaaaga
gactctggaattgtatcattcacaacccgcttacttgtgccaacctcacgtattggttgc
cttattggtaaaggaggagctattgtaacagagatgagaaggatcacaaaagctaatatc
cgtatcctgtcaaaggagaatcttccaaaaattgcatctgaagatgatgagatggttcag
attgctggagaccttgatgttgcaaaggatgcccttgtacaaataacaacacggttaaga
gcaaatctttttgatagggaaggcgctgttaatgcgttggtgccagttttaccgtatctt
catgtgccaactgaaggaacagacagtttgagttatgaaagtagagagggaaaaaggcat
ggacgtgtgcactccttttctggtggttatggctctagtgatttagctgctagtgatggc
tatggaagttatggtggtctccagattggtagtactactggtgcttatggagcttattct
tcaggacgaggtggtccttctgggttatcaagccatacctctgtttcccggcgctaa
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