Gossypium hirsutum (upland cotton): 107888594
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Entry
107888594 CDS
T04793
Name
(RefSeq) structural maintenance of chromosomes protein 4-like
KO
K06675
structural maintenance of chromosome 4
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107888594
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
107888594
Condensin II
107888594
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
Tropomyosin
Laminin_II
FlaC_arch
SlyX
ABC_tran
Motif
Other DBs
NCBI-GeneID:
107888594
NCBI-ProteinID:
XP_016668248
UniProt:
A0A1U8HWC5
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Position
A09:complement(4171646..4180755)
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AA seq
1245 aa
AA seq
DB search
MGVETKDEFATREPEQAQVGSRGPRLVINEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNG
SGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGTYE
AVPGSEFVISRVAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQIS
LMKPKAQGPHDEGFLEYLEDIIGTNKYVEKIDESSKELESLNEKRSGVVQMVKLAEKERD
SLEDVKNEAEAYMLKELSLLKWQEKAAKLAHEDTNLKMVELRENVSNLEENLKNKREEIQ
ESSKRLKEIESVHNKHLIRKEELDNDLRTCKEEFKEFERQDVKYREDLKHMKQKLKKLED
KLEKDSSKIEDVSKECENSKNLIPKLEENIPKLQKLLLDEEKLLEEMKENSKVETEKYRS
ELSKVRAELEPWEEELIVHKGKLEVAHTERNLLTQKHEAANTAFKDAQKEMDNISGKTET
ITAAIKDKQTDLEKNKLGALEARKLEQTCIKEQEALIPLEQAAREKFAELKSVLDSEKSQ
GSVLKAILQAKESKQIEGIYGRMGDLGAIDAKYDVAISTACPGLDYIVVETTAAAQACVE
LLRREQLGIATFMILEKQLDLLERSKEKVRTPEGVPRLYDLIKVQDERIKLAFYAALGNT
IVAKDLDQATRIAYGGNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRAASVSR
ETVVAAEKELANMVDSLNNIRQSIADAARRYQASEKVVAELEMEIAKSQKEVDSLNSEYK
YLEKQLDSLEAASRPKKDEIDRLEELKKIISTEEKEIDRLIQGSKKLKEKASDLQNKIEN
AGGEKLKTQKSKVEKIQSDIDKNSTEINRHKVQIETGEKMVKKLTKGIEESKKEKERIIE
GKDKMHGMFKEIEQKAFIVQDNYKKMQKVIDEHGEVLEKSKLEYEKVKKNVDQLRASEVD
ADFKLHDMKKMYKELEMKGKGYKKKLNDLEISLQKHMEQIQKDLVDTEKLQATLADETLT
EACDLKRALEMVTLLETQLKEMNPNLDSISEYRNKVSVYNERVEDLNTVTQQRDDIKKQY
DELRKKRLDEFMAGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKS
WKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDA
QFIIISLRNNMFELADRLVGIYKTDNCTKSITINPNSFVVCEKAA
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggaaacgaaggatgagttcgcgactcgcgaaccagagcaggcccaagtggga
tctcgaggaccgaggttagtaattaacgagatggtgatgaggaacttcaagtcttatgcc
ggtgaacagcgcgtcgggccctttcacaagagcttttctgctgtggttgggccaaatgga
agtggtaaaagcaatgtgatagatgccatgctttttgtatttgggaagagagcaaagcag
atgcggcttaataaagtttctgagcttattcacaattcaactaatcatcaaaatcttgat
agtgctggtgtttctgttcattttcaggagattattgatctggatgacgggacatatgaa
gctgttccaggaagtgaatttgttatttcccgggttgcatttcgggataactcatccaaa
tattacatcaataaccgtgctagtaactttacagaagttacaaagaaactgaaagggaaa
ggagttgatcttgacaacaatcggtttcttattcttcagggtgaggttgagcaaatttcg
ctcatgaagccaaaagcacaagggcctcatgatgaaggtttccttgaatatttggaggac
ataataggaacaaacaaatatgttgaaaagattgacgaatcatctaaggagttagaaagt
ctcaatgaaaaacgatcaggtgttgtgcaaatggttaaattagcagagaaagaaagagat
agcttggaggatgttaagaatgaggcagaagcgtacatgttgaaagagctttctctcttg
aaatggcaagagaaagctgcaaaattggcccatgaagataccaatttgaaaatggtagaa
ttacgggaaaacgtttccaacttagaagaaaatttgaagaataaaagggaagagattcag
gagagcagtaagaggttgaaggagattgagtctgtgcacaacaagcacctgataagaaaa
gaggaacttgataatgatttgagaacctgtaaggaagaattcaaggagtttgaaaggcag
gatgtcaaatacagggaagatttgaagcatatgaaacagaagctaaagaaactagaggat
aaacttgaaaaggattcttcaaaaattgaggatgtgtcaaaggagtgtgagaactcaaaa
aatcttatcccaaaacttgaggagaacattccgaagctccaaaagcttttgctggatgag
gagaaactcctagaagaaatgaaagagaattctaaagttgaaactgagaaatatcgctct
gagctttcaaaggttcgtgctgaattagaaccttgggaagaggagttgattgtgcataag
ggaaagcttgaagttgctcacactgaacgtaaccttctaactcaaaagcatgaagctgct
aatacagcttttaaggatgctcaaaaagagatggacaacatatcgggaaaaactgaaact
ataactgctgccattaaagataagcaaactgatctggaaaagaacaagcttggagcattg
gaagcacgcaaattggaacagacatgcatcaaagaacaagaagcattgattcctcttgaa
caagcggcaagagagaagtttgcagaactgaagtcagtgcttgattctgagaagagccag
ggatcagttctaaaagcgattttgcaggctaaagaatccaaacaaattgagggaatatat
ggcaggatgggtgatttaggtgctattgatgcaaagtatgatgttgccatctcaactgca
tgtcctggacttgattatattgtggtggaaaccactgctgcagcacaagcatgtgttgaa
ctactccgtagggagcaacttggtattgcaacgttcatgattctggagaaacagcttgac
cttctagagaggtcaaaggagaaagtaagaacccctgagggagttccacgtctctatgac
ttgattaaagttcaggatgaaagaataaaacttgctttctatgctgccttgggtaacacc
attgtagcaaaggatcttgatcaggcaacacgtatagcatatggtggaaacaaagaattt
cgacgtgtggtaacacttgatggtgctctatttgaaaaatctggtaccatgagcggaggg
ggaagcaagccacgtggtggtaagatggggacatctattcgagctgccagtgtgtctaga
gaaactgttgttgctgctgagaaggagcttgctaatatggttgattcattaaataacatt
aggcaaagcattgctgacgcagcaaggcgttaccaagcctcagagaaggtagttgcagag
ttggagatggagatagctaaaagccaaaaagaggttgacagcttgaattcggaatataaa
tatcttgaaaagcaacttgattccttggaggctgcatcacggccaaagaaggatgaaatt
gatagactggaggaacttaagaagataatttctacagaagaaaaagagattgatagactc
atccaagggtctaaaaagttgaaggaaaaggcttcagatctgcagaataaaatagaaaat
gctggtggtgaaaagttgaaaacacagaagtccaaagttgaaaagatacaatctgatatt
gacaagaacagcacagagatcaaccgtcacaaggttcaaatagagactggtgagaaaatg
gtgaagaaattaacaaaggggattgaggaatcaaagaaggagaaagaacgaatcattgag
gggaaggataagatgcatggcatgtttaaagaaatagagcagaaggcctttatagttcaa
gataattataagaaaatgcagaaggtaatcgatgaacatggagaagtgctggagaagtca
aaattggagtacgaaaaagtgaaaaagaatgttgatcagttgcgtgcatcagaggtggat
gctgactttaagttgcacgacatgaaaaagatgtataaggaactagaaatgaaggggaag
ggatacaagaaaaagctaaatgacttggaaatcagtctacaaaagcatatggaacagata
cagaaagatcttgtagacacagaaaagcttcaagcaactttggctgatgagaccttgact
gaggcctgtgacctaaagagggcccttgaaatggtgactttactggagacacagctgaaa
gagatgaatcccaaccttgattcaatatcagaatatcgaaataaggtatcagtgtacaat
gaacgagttgaggatcttaacacagttacccaacaacgtgatgatataaagaagcaatat
gatgagttgagaaagaaaaggttggatgagttcatggcaggattcaatgcaatatctttg
aagttaaaggagatgtatcagatgatcaccctcgggggagatgcagaacttgaactagtg
gactctttggatccattctcggaaggtgttgttttcagtgttcgacctcctaagaaaagc
tggaagaacattgcaaacttatcgggtggtgaaaagacactcagctcgttagctctggtt
tttgctcttcatcattacaaaccaaccccactttacgtaatggacgaaattgatgcagcc
ctagatttcaagaatgtttccattgttggacattacgttaaagatcggacaaaggatgca
cagtttataatcataagcttgaggaataacatgtttgagttggctgatcgacttgttgga
atctacaaaactgataattgtacaaaaagcattacaatcaatcccaacagcttcgtggtg
tgcgagaaagctgcatga
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