Gossypium hirsutum (upland cotton): 107888741
Help
Entry
107888741 CDS
T04793
Name
(RefSeq) protein FAR1-RELATED SEQUENCE 12-like
KO
K17604
zinc finger SWIM domain-containing protein 3
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107888741
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107888741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAR1
MULE
ZSWIM1-3_RNaseH-like
SWIM
Hex_IIIa
Motif
Other DBs
NCBI-GeneID:
107888741
NCBI-ProteinID:
XP_016668417
UniProt:
A0A1U8HQU1
LinkDB
All DBs
Position
A09:13304734..13308129
Genome browser
AA seq
789 aa
AA seq
DB search
MGEGCKSSETSSPEKSREATESENDSWSGSASLVEKSVVEINGDECQAPPEIPLVNKYEM
NVDSEQESQSLDSVSVDVLVPGVHVKDGEDLFMVPAVGMEFESEEHAYKCYSRYAVLEGF
SIRKDFVNKSRVTGAVVSRRFTCYRQGYRPSKHTMNTRKPRKETRTGCLAHMTIAWQPYG
KFRVTNFENKHNHEFVNPSTAHLLPSQKRLAFAEAVEADLDSSSGVDGVPKLGMGFESED
HAYEFYNSYAGQVGFSVRKDSVNRSKIDGAVVSRRFTCFREGFRQKDKRDLNIKRPRKET
RIGCLAQLVISHQSDGSYRVTNFEEKHNHELVAACRIRMLRSQKRLVAAQIAEGNAIEGR
KIQLKSAYEVSCNSIEACVDHAYDPVDRRSKLISKRTREMRDGEAEKIQQYFQGKKVKNP
SFFYAIQLDADNQIANIFWTDAKMVMDYSDFGDVLCFDTTYRINEDCRLFSPFVGVNHHR
QMVIFGAALLYDETVDSFKWLFQKFLEAMSGKKPKTILTDQDEIVSEAISSILPDINQRV
CVWHVYQRALKQLSHMFIGSPPFVNDLLSCFFDHEEEEDFIASWNHMMDLHGVWDNEWLN
KIFKTREQWAIAYKRHIFCADIKSVQLRGSFILNLKKYLKSDSDVLSFLKQLGKMVNDCH
HKELEANYDMSQNMPKLMGDVILLKYARDAYTPRIFELLQQEYETCLNIVVNQCIENGSL
LEYKVSIYGQPREYTVSYNLSNNTVCCSCMQFEFIGVLCSHALKVLDYSNIRSLPSQYIL
KRWTREARV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaggatgtaaaagctctgaaacctcctctcctgaaaagagtcgagaagctact
gaaagcgagaatgatagttggagtggaagtgcttctttggtcgagaagagtgtggtggaa
attaatggggacgaatgccaggcaccccctgaaattcccttagtcaacaagtatgagatg
aatgttgatagtgaacaagagtctcagagtctggattctgtatctgttgacgtgttagtt
cccggagttcatgtaaaagatggcgaagatttatttatggttccagcagttggaatggag
tttgaatcagaagaacatgcatacaagtgttatagtagatatgctgtattggaagggttt
agtattagaaaagatttcgtgaacaaaagtcgagtaactggtgctgttgtatcccgaaga
ttcacctgttacagacaaggttatagacctagcaagcataccatgaatacgaggaagccc
cgcaaagagacgagaactggttgcttggctcatatgactattgcatggcaaccttatgga
aagtttcgtgtcactaattttgaaaacaagcacaaccatgagtttgtgaatccgtcaaca
gctcatctattaccatcacagaagaggttagcctttgctgaagcagttgaagctgactta
gatagtagttcaggagtggacggcgtgcctaagcttggaatggggttcgaatcagaagat
catgcatatgagttttacaattcatatgcaggacaagttggtttcagtgttcgaaaagat
tctgtgaataggagtaagatagatggtgctgtggtgtcaaggcggtttacttgcttcaga
gaagggtttcgccagaaagataaaagggatttgaatataaagagacctcgaaaagaaaca
agaattggttgtttggcgcaactagtcatttctcatcagtctgatggtagctaccgtgtc
actaatttcgaagaaaaacacaatcacgagcttgttgcagcatgtcggattagaatgtta
cgatcacaaaagcggttggttgcagcccaaattgccgaaggcaatgcaattgagggtcgt
aagatacaactaaagtcagcatatgaagtatcatgtaactcgattgaggcttgtgtcgac
catgcatatgatccagtagatcgaagaagtaaattgatttccaaacgtactcgagaaatg
agagatggagaagctgaaaagatacaacaatattttcagggtaagaaagtgaaaaatcca
tcctttttctatgccatccaactcgatgctgacaatcaaatagctaatattttttggact
gatgcaaagatggtaatggactacagtgactttggtgatgtactttgcttcgatacaacc
tacaggataaatgaagattgtcgtctattttcaccgttcgttggggtgaaccatcatagg
caaatggtgatctttggtgctgcacttttatatgatgaaactgttgattctttcaagtgg
ctgttccaaaagtttttggaggcaatgtctggtaagaagccaaaaacaatcctcactgat
caagatgaaatagtgtctgaagcaattagttccatattaccggacataaaccaacgagta
tgcgtttggcatgtgtaccaaagggcactcaagcaactgagtcatatgtttataggttct
ccgcctttcgtgaatgacttactcagttgctttttcgatcatgaggaagaagaagacttc
attgcttcatggaaccatatgatggatctacatggtgtttgggataatgaatggttgaac
aagattttcaaaaccagggagcaatgggccattgcatacaaacggcacatcttttgcgcc
gacataaaatccgtgcaactgcgtggaagttttatacttaatctaaagaaatacttaaag
tctgattctgatgttctttcattcctcaagcaacttgggaaaatggtgaatgattgccac
cacaaagagttggaagctaattatgatatgtcccaaaacatgccgaaactaatgggggat
gtgattctcttgaagtatgcaagagatgcttacacaccaaggatattcgaattgttgcag
caagaatacgaaacatgtctgaatattgttgtcaatcaatgcattgagaatggttcgctg
ctcgagtataaagtcagcatatacggccaacctagagagtacacagtaagttataacttg
tctaacaacaccgtttgttgtagttgtatgcaattcgagtttataggagtgttatgcagt
catgcattaaaagtgctagattatagtaatattaggtcgctcccaagccaatacatctta
aagaggtggacaagggaggccagagtttag
DBGET
integrated database retrieval system
