Gossypium hirsutum (upland cotton): 107888846
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Entry
107888846 CDS
T04793
Name
(RefSeq) protein CASP
KO
K09313
homeobox protein cut-like
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107888846
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
107888846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CASP_C
HAUS6_N
Swi5
Motif
Other DBs
NCBI-GeneID:
107888846
NCBI-ProteinID:
XP_016668586
UniProt:
A0A1U8HRG5
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Position
A09:complement(41407373..41424652)
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AA seq
682 aa
AA seq
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MDAPQGGSDGDKTNPSSSPVSVVSNFWKEFDLEKEKSVLDEQGLRIAENQENSQKNRRKL
AESTRDFKKAAPEEKLSLFNSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPA
LASISEQDLKISELESENRKVKVELEEFRTESMHLKNQQATIRRLEERNRQLEQQMEEKV
KEIVEMKQRSLAEENQKTLEVLKDREQSLQDQLRQAKESVSNMQKLHELAQSQLFELRAQ
SEEDRAAKQSEVNLLMDEVERAQTRLFSLEREKGLLRSQLQSANEESENKRSDVDSNAIL
ENSLSSKEKIISELNMELHNIETTFSNERVQHVNEIKKLNSLLNEKDVALEEMKKELKAR
PTEKLVDDLCKKVKILQAVGYNSIEAEDWEAATSGEEMSKMESLLLDKNKKMEHELTQLK
VKLSERTSLLETAEGKIVELAEKVNEQQKLIQKLEDDILKGYSSKEKKGTLFDDWDLSES
GGNELSENTDQKQVSADQDQSSMLKVICNQRDRFRARLRETEEEIRQLKEKIGELTTELE
KTKADNVKLYGKIRYVQDYNQEKVISRGSKKYAEDLESGFTSDVESKYKKIYEDDINPFA
AFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHILVFTCLYRMSALS
YLSHGSEETAVVEKNLNRPRGY
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggatgctccgcaaggcggatccgacggcgacaaaaccaatccttcctcttctcctgtc
tccgttgtctccaatttctggaaagaatttgatctggaaaaagagaaaagtgtgcttgat
gaacaaggactcagaatagctgaaaatcaggaaaacagccagaaaaataggcggaagctt
gctgagagtacaagagatttcaagaaagctgcgccagaggaaaaattaagtttatttaat
tcattacttaagggctaccaagaagaagttgataatcttaccaagagggcaaaatttggc
gagaatgcttttctgaacatctatcaaaagctttatgaggctcctgatccttatcctgct
cttgcttcaatttctgagcaagatctaaaaatctctgaattggaatctgagaaccggaag
gtgaaagttgagcttgaagagttcagaacagaatcaatgcacttaaaaaatcagcaggca
acgataagaagacttgaagagcggaatagacaattagagcagcagatggaggaaaaagtg
aaagaaattgtggagatgaagcagcgcagtttagcagaagaaaaccagaaaactctagaa
gtcttaaaagacagggagcaatctttgcaagatcaattacggcaagctaaagaaagtgta
tcaaacatgcaaaaactgcatgaacttgcacagagccagctgtttgaacttcgtgctcag
tcagaggaagatagggcagcaaagcaatctgaggtcaaccttttgatggatgaagtagag
cgagcccaaactcggctttttagtctggagagagagaaggggcttctacgctcacaattg
cagtcagcaaatgaagagtcagaaaacaagagaagtgatgtagattcaaatgccatactt
gaaaactccctaagttccaaagaaaagataatctctgagctgaacatggaacttcacaat
attgaaactaccttttccaatgaacgagtgcaacatgtcaacgagatcaagaagttgaat
tcgttgctcaatgaaaaggatgttgctcttgaggagatgaagaaagaacttaaagcaagg
ccaacagaaaagttggttgatgatttgtgtaagaaagtgaaaattttgcaggcagtgggt
tataattcaattgaggctgaagattgggaagcagctaccagtggggaagagatgagtaaa
atggaatctcttcttctcgacaaaaataagaaaatggaacatgaacttacacagctgaag
gtcaaactttccgagagaacatctttgctggaaacagctgaaggcaaaatagtagaactc
gcggaaaaggttaatgaacaacaaaagctgatacagaaattagaagatgatatattgaag
ggttatagttccaaagaaaagaaaggaactctttttgatgattgggatctttcagagagt
ggagggaatgaactttccgagaacacagatcagaaacaagtttccgcagatcaagaccaa
agctcaatgctgaaggtgatctgcaatcagcgtgatcgatttagggcacgtttgcgggaa
actgaagaagaaataaggcaattaaaggagaagataggggagctaacaacagaactggag
aaaacaaaagctgataatgttaaactttatggaaagattcgttatgtccaggattataac
caggagaaagtaatttctagaggatcaaagaagtatgccgaggatcttgaaagtggtttc
acctcagatgttgaatccaagtacaagaagatatatgaggatgatattaatccctttgca
gcattctcaaaaaaggagagggatcaaagatacaaggagctgggcttcagagacagaatc
acactcagcagcggacgttttcttctgggaaacaagtatgctcgaacgtttgcatttttc
tacacaattggtttgcatatcctagtgtttacttgtctataccgaatgtccgctctaagc
tacctcagccatggctctgaggaaactgccgtcgttgagaaaaacttgaaccgcccgcgt
ggatattag
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