Gossypium hirsutum (upland cotton): 107888875
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Entry
107888875 CDS
T04793
Name
(RefSeq) myosin-8-like isoform X1
KO
K10357
myosin V
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107888875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107888875
04131 Membrane trafficking [BR:
ghi04131
]
107888875
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107888875
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107888875
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107888875
mRNA cycle factors
P-body specific factors
107888875
Membrane trafficking [BR:
ghi04131
]
Others
Actin-binding proteins
Myosins
107888875
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107888875
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107888875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
TACO1_YebC_N
AAA_22
Zeta_toxin
nSTAND3
Motif
Other DBs
NCBI-GeneID:
107888875
NCBI-ProteinID:
XP_016668612
UniProt:
A0A1U8HRF1
LinkDB
All DBs
Position
A09:complement(51212621..51242665)
Genome browser
AA seq
1467 aa
AA seq
DB search
MVSQVAPSNIIAGSIVWVEDPEVAWIDGEVKEIKGEKITVKCTSGKLVVRKTSNVYPKDP
EFPPSGVDDMTKLAYLHEPGVLQNLRCRFDINEIYTYTGGILIAINPFQRLPHLYENRVM
EKYKGANVGELSPHPFAIADSAYRQMIKEQISQAILVSGESGAGKTESTKMLMQYLAFMG
GRNNNTGERSVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDGRGRISGAAIRT
YLLERSRVCQVSDPERNYHCFYMLCAAPPEDVEKFKVGNPQTFHYLNQSNCFELDVLDDS
KEYLETKRAMDIVGINQAEQEAIFRVVAAILHLGNVEFVKGKKTDGAEPKDDKSRLHLKT
AADLFMCDEKSLEDSLCKRVIVTRGDRITKSLDPATAAISRDALAKIVYSKLFDWLVQKI
NISIGQDLESKFLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKK
EQIDWSYIEFVDNQDILDLVEKKPGGIIALLDEACMFPRSTHETFAEKLYQTFKDHKRFV
KPKLSRTDFTICHYAGDVTYQTELFLEKNKDLVVPEHQALLNASKCSFVSSLFPPLPEET
SKSSKFSSIATGFKQQLQSLLETLNATEPHYVRCIKPNNALKPGIFENNNILQQLRCGGV
MEAIRISTAGFPSRKMFREFINRFSILAPEVLNGSYNDVAASKRILEKSNLSGYQVGKTK
VFLRAGQMAELDARRGAVLGVSAIVIQRKVRAYLSRRHFILLRLSSIKLQAFCRGQAVRH
QYARMRRAAACLNIQKHSRKFLARKAYKNLYFSSVTIQAGIRGMIARDKLLLRKQMRAVT
VIQSQCRRFLASRHYLRLKKAAITTQCAWRGKLARRELRNIRMAAKETGALLEANTKLEK
QVEELTWELKKMQREKELLMKESGGTKNIAGKVPIIKEVPVIDNEFMVKLTAENEQLKAL
VTSLEKQIEETSKLSEERLKQASEAEMKIIELKTAMQRLEEKISDMETEDKILRQKALQS
APSRKMSPQSSFASSTPLQNGNHAQLNSGPSKRFGREDSRMRRSKIELPQAQEGVDSLIK
CTTQNLGFSQEKPVAAFTIYKCLVHWRTLEAERTSVFDNLIQMIGSSLEKQDDNDHMAYW
LSNTSALLFLLQSSLKSSAAAQKPPAPTSFFSRMTQSFRSSSANLAVGVVRQVEAKYPAL
LFKQQLTAYAEKIYGIIRDNLKKDLSLLLSCCIQVPRASKGTAFKTFEESEEVDSSPACH
WQRIIESLNKHLSTLKENFVPPTLIQKIFIQIFAYINTQLFNSFLVRRECCTFSNGQYVK
YGLAELELWCAQVTEEYAGSSWGELKHTRQAVAFLVLQEKSSITYNEITNELCPVLSVQQ
LYRICALFRDDSNYAPSVSPDVISSMKHLLSDGSADDGGSTFLLEDDISFPFSVEDIIGS
MRVKEFAEVKPTAELTENPAFQFLLQD
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcacaggttgctccatccaatattattgctggatctattgtttgggtggaggac
cctgaggtagcttggatagatggtgaagttaaagaaattaaaggggaaaagattacagta
aaatgtacatcagggaaactggttgtgaggaagacatctaatgtgtatccaaaggaccct
gaatttcctccctctggtgttgatgatatgacaaagctagcatatttgcatgaacctgga
gttctgcagaatttaagatgtcgatttgatattaatgaaatatatacctacacaggaggt
atattgattgctataaatccttttcaaagattgccacatttatatgaaaatcgcgtgatg
gaaaaatacaaaggggcaaatgtgggtgaacttagcccacatccatttgctattgcagat
tctgcctatagacagatgattaaggagcaaataagccaagcaattttggtaagtggggaa
agtggagctggtaaaacagagagtacaaagatgcttatgcagtatctagcttttatggga
gggagaaataacaacacaggggaacgatctgtggagcaaaaggtcttggagtcgaatcct
gttctagaagcattcgggaatgcaaagactgtcagaaacaataattcaagtcgctttggc
aagtttgtggaaattcagttcgatggaagggggagaatttctggagctgcaataaggact
tatttgcttgaacgatctcgtgtttgccaagtgtctgatccagagagaaactatcattgc
ttttacatgctttgtgctgcaccgccagaggatgttgagaagttcaaagttggaaatcca
caaacttttcattatttgaatcagtcaaattgttttgagctggatgtactagatgattct
aaagagtatcttgagactaagagagctatggatattgttgggatcaaccaggcagagcag
gaggcaatatttcgagttgtggctgctattctacatttaggaaatgttgagtttgtaaag
ggaaagaaaacagatggtgctgaacctaaagatgataaatctcggttgcatctaaaaact
gctgcagacttattcatgtgtgatgaaaagtctcttgaagactccttatgtaaacgtgtt
attgtgactcgtggtgatcgcattacaaaatctcttgatccagctactgcagctatcagc
agggatgctttggccaaaattgtttattcaaaattatttgactggctcgttcagaagata
aatatttctattggtcaggatctggaatcaaaattcttgattggtgtcctggatatttat
ggatttgagagtttcaagacaaacagttttgagcaattttgcatcaatttgacgaatgaa
aagctgcaacagcattttaatcagcatgtttttaagatggagcaggaggaatataaaaag
gaacaaattgactggagttatatagagtttgttgataatcaagatattcttgatcttgtt
gaaaagaaacctggtggcatcattgctcttcttgacgaggcttgcatgtttcctcgatca
acacatgagacatttgcggaaaaactctatcagacttttaaggaccataaacgcttcgtt
aagcctaagttgtcacgcactgacttcaccatttgccattatgctggtgatgtgacttac
caaactgagctattcctggagaagaacaaagatttagttgttccagagcatcaggctctc
ttgaatgcttccaaatgctcttttgtttcaagcttgtttcctcctttacctgaggaaact
tccaaatcatcaaaattttcctcaatagctactggcttcaagcaacaactccaatcttta
cttgagactttgaatgccactgaaccacactatgtacgttgtataaagccaaataatgct
cttaagccaggaatatttgaaaataataatatactacaacaacttcgttgtgggggagtg
atggaagcaattagaattagcactgctggatttccctctcgaaagatgtttcgtgaattt
ataaatcggttttccatattggctccagaggttctcaatgggagctataatgatgttgct
gctagcaagaggattctggaaaagagtaacctcagtggttatcaggttggtaaaacaaaa
gtttttctgagggcgggtcagatggctgaactagatgcacgtcgaggtgcggttttagga
gtatcagcaattgttatacagagaaaagtccgtgcatatttgagtcgcagacactttatc
ttgttgcggttatcttccataaaacttcaagccttctgtagaggacaagcagtacgccat
cagtatgctaggatgagaagagcagctgcttgtttgaatattcaaaaacattcacgcaag
tttcttgctaggaaagcatacaagaatttgtacttctcatctgttaccatccaagcgggt
attcgtgggatgattgctcgtgataaacttctattgaggaagcagatgagagctgtaaca
gtaattcagagtcaatgtcgccgattcttagccagccgtcattacttgaggttaaagaaa
gcagcaatcaccacacaatgtgcttggagaggaaaacttgcacgtagagaattacggaat
ataagaatggctgccaaggaaactggtgccctcctagaagccaacactaagctggaaaag
caagttgaagaacttacatgggagttgaagaagatgcaacgtgaaaaagagttactaatg
aaggaaagcggaggcacaaagaacattgctggaaaagttcctataattaaggaggtccca
gtaattgataatgaatttatggttaagcttactgctgaaaatgaacagcttaaggctctg
gtaacttcattagaaaagcaaattgaagaaacaagcaagcttagtgaagagcggctaaag
caggcttcggaggctgagatgaagataattgagctgaaaactgcaatgcaaagattagaa
gaaaagatctcagacatggaaactgaggacaagattttgagacagaaagcattgcagagt
gcacctagtaggaaaatgtcaccacaatcgtcatttgcgtcatctacacctttgcaaaat
ggtaatcatgctcaattgaattctggtccatcaaaaaggtttggtagagaagatagcaga
atgaggagatctaagattgaattgccacaagcacaagagggtgttgattctctaataaaa
tgtaccacacagaatcttggattcagccaagaaaagcctgttgcagcatttacaatatac
aaatgccttgttcactggagaacattagaagctgaaaggacaagtgtatttgataatctt
attcagatgattggctcttcactagagaaacaagatgacaatgatcacatggcttattgg
ctgtcgaacacatctgctttgttgtttttgcttcaaagtagtttgaaatcctctgctgca
gcacagaagcctcctgctccaacttcatttttttccaggatgacccaaagttttcgttca
tcttctgcgaatctagcagttggtgtagtacgccaggttgaggccaagtatccagctcta
cttttcaagcagcagctcacagcatatgcagaaaaaatctatggaatcattagagacaac
ttgaaaaaggacttgtcattgcttctttcttgttgcatccaggtacctagggcatcaaag
ggaactgcttttaaaacgttcgaagagtcagaagaagtcgatagctctcccgcttgtcat
tggcaaagaattattgaatccctgaacaagcatctgagcacattaaaagaaaattttgtg
cctccaacacttattcagaagattttcattcaaatatttgcatatataaatacacagctc
tttaatagctttcttgttcgtagagagtgctgcacatttagcaatgggcaatatgtgaag
tatggcttagctgaactggaactatggtgtgcccaagtgacagaagagtatgcaggatca
tcatggggtgaactcaaacacacaaggcaagctgttgctttcttggttttgcaagaaaaa
tccagcataacttacaatgaaatcacaaatgaactttgtcctgttctgagtgttcaacaa
ctttaccgaatatgtgcactttttagggatgacagcaactacgctccaagtgtttcacca
gatgtaatttccagcatgaaacatctattatcagatggttccgcagatgatggtggcagt
acctttctgttggaagatgatatcagctttccattctcagtggaggacattattggttct
atgagagtaaaagaattcgccgaggtaaaacctactgcagaacttactgagaatccagcc
ttccaatttttactacaggattaa
DBGET
integrated database retrieval system