Gossypium hirsutum (upland cotton): 107888927
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Entry
107888927 CDS
T04793
Name
(RefSeq) cullin-1
KO
K03347
cullin 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107888927
04120 Ubiquitin mediated proteolysis
107888927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107888927
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
107888927
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Methylase_S
Motif
Other DBs
NCBI-GeneID:
107888927
NCBI-ProteinID:
XP_040933647
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Position
A09:complement(56204911..56212262)
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AA seq
742 aa
AA seq
DB search
MNERKTIDLEQGWEFMEKGITKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYS
QQLYDKYRESFEEYITSTVLPSLREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYF
IARRSLPPLNEVGLTCFRELVYQELNAKVRDAVISLIDQEREGEQIDRALLKNVLYIFVE
IGMGQMDYYENDFEATMLKDTAAYYSRKAANWIVDDSCPDYMLKSEECLKCEKDRVSHYL
HSSSEPKLLEKVQHELLSVWETRLLDKEHSGCHALLRDDKVDDLSRMFRLFSKIPRGLDP
ISSIFKQHVTAEGTALVKQAEDAASTKKADKKDVVGMQEQVFVRKVIELHDKYLAYVNDC
FQNHTLFHKALKEAFEVFCNKGVIGSSSAELLATFCDNILKKGGSEKLSDEAIEETLEKV
VKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVT
DLTLARENQASFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFR
DFYQTKTKHRKLTWIYSLGTCNLIGKFEPKTMELIVTTYQASALLLFNSSDRLSYSEIMT
QLNLTDADVIRLLHSLSCAKYKILNKEPSTKTISSTDHFEFNSKFTDKMRRIKIPLPPLD
EKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLGRMFKPDFKAIKKRIE
DLITRDYLERDKDNPNTFRYLA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagagaaagacgattgatcttgaacaaggatgggagtttatggaaaaaggaatt
acaaagttgaagaacattttagaaggcttgccagagccgcaatttagctccgaggattat
atgatgctttatacaacaatttacaatatgtgtacccaaaagcctcctcatgactattct
cagcagttgtatgataagtatcgagaatcctttgaagagtacatcacttcaacagtactt
ccttctttacgagaaaagcatgatgagtttatgttgagagagctggtcaaaaggtggagt
aatcataaagtaatggttaggtggctttctcggttcttccattaccttgatcggtacttt
attgctcggaggtcactacctccccttaatgaagttggactcacgtgtttccgagaactg
gtttaccaagagctaaatgcaaaagtgagagatgctgtaatttctctgatcgatcaagaa
cgtgaaggtgagcagattgatcgcgctttgttgaagaacgttttatatatatttgttgaa
attggaatggggcaaatggattactatgagaatgactttgaggctactatgctcaaagat
actgctgcctactactcgaggaaggctgcaaattggatcgtagatgattcttgtccagat
tacatgttgaaatccgaggaatgtttaaaatgtgagaaggatagggtctcccattacttg
cattctagtagtgagccaaaactgcttgagaaagttcaacatgagttgttatctgtatgg
gaaacccgacttctcgataaagagcactccggctgtcatgcattgctcagagacgacaag
gtggatgatttgtcaagaatgtttagactcttttctaaaattcctcgaggcttagatccc
atatcaagcattttcaaacagcatgttactgctgaaggcacagctttggtcaaacaggct
gaggatgctgcaagcaccaaaaaggctgataaaaaggatgtcgttggcatgcaagagcag
gttttcgtgaggaaagtgattgagctgcatgataagtacctagcctatgtgaatgattgt
tttcaaaatcatactctctttcacaaggctctcaaggaggcttttgaagtcttttgcaat
aagggtgttattggaagctcaagtgcagagctacttgccactttttgtgataatattctc
aagaaaggtggcagtgagaaattgagtgatgaagcaatagaagaaacacttgaaaaggtt
gtgaagctacttgcttatattagtgacaaagacttgtttgctgaattctatcggaaaaag
cttgctcgaaggcttctttttgacaagagtgctaatgatgaccatgagagaagtatatta
acaaagctgaaacagcaatgtggtggtcagttcacctcaaaaatggagggaatggttaca
gatttgacattggcaagggaaaaccaggcaagttttgaggagtacttgagcaataatccg
aacgcaaatccagggattgacttgacagtaactgttttgactactggattttggccaagt
tacaagtcttttgatctcaatcttcctgctgagatggtcaagtgtgttgaagttttccgg
gacttctaccagacaaaaaccaaacaccgcaaacttacttggatatattctttgggcact
tgtaatcttattgggaagtttgaaccaaagacgatggagttgattgtcacaacatatcag
gcctctgccttattgctgttcaactcctcagatcgcctgagctattccgagatcatgaca
caattgaacttaacggatgctgacgtaattagacttttgcattcgttatcttgtgcaaag
tataaaatccttaacaaggagccaagcacaaaaaccatctcttccactgatcattttgaa
ttcaactccaagtttactgataaaatgaggaggatcaagattcctcttccccctctggat
gagaagaagaaagtaatcgaagatgttgacaaggatcgacgatatgccattgatgcctca
attgtacgtatcatgaagagtcggaaagttctgggtcaccagcagttggttatggagtgt
gttgagcaattgggccgcatgttcaagccggacttcaaggccattaaaaagcgaatagaa
gacctgattactcgagactatcttgagagggacaaagataaccccaatacattccggtat
ttggcatga
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