Gossypium hirsutum (upland cotton): 107888943
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Entry
107888943 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107888943
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107888943
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107888943
04121 Ubiquitin system [BR:
ghi04121
]
107888943
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107888943
Peptidases and inhibitors [BR:
ghi01002
]
Metallo peptidases
Family M67
107888943
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Others
Others
107888943
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
107888943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
107888943
NCBI-ProteinID:
XP_016668709
UniProt:
A0A1U8HZ99
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All DBs
Position
A09:complement(56927077..56932307)
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AA seq
507 aa
AA seq
DB search
MKIDVNAMARRVEVDNRIPLRYYYRIADNLLKQASIYRDEKNIVDLYIILLRYSSLVSET
IPFHRDYHVSLQKEKAMYRKRLLAVLDELESLKPKVHRRIEELNKARAGAKLLEPDGYKT
TSYGSEKTSPLEWPHVNKGSSMNLDIKQPANMAVQSSWKYNNDRNQIDNQFQKLSLNIPL
PNKETLSRHSFLGPNGLRGQWLGPSAEINVQYPSNMDLVPAENSGPNQAGQYGPLAVKDG
DPGQVGSAMESVLSLDDGRWLQPAEGSCHPLITEAKEDPFQFVSIKQPLPPPVLAQVQQD
FTPIPPSRVADPRPGPAKPSEDGMPNTNSYQHLHVPVRMMEDFLRLARSNTEKNLETCGV
LAGSLKNRAFHITTLIIPKQESTSDSCSTLNEEEIFEVQDKLSLFPLGWIHTHPTQTCFM
SSVDLHTHYSYQIMLPEAIAIVMXPTDTSSPHGIFHLSDPGGVSIIRNCQQRGFHPHEEP
LDGTPIYEHCSHVFMNPKIKFDVVDLR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgacgttaatgcgatggctcgtagagtcgaagtcgataatcgaattcctctc
cgttattattaccgaatcgccgataatctcctcaaacaggcaagcatttaccgagatgaa
aagaatatagtagatttgtatataatactacttagatattcaagtttggtatcagaaact
ataccatttcatcgggattaccatgtttcacttcagaaagaaaaggctatgtatagaaag
aggcttttagctgtacttgatgagcttgaatctttgaaaccaaaggttcaccggagaatt
gaagaactaaataaagctcgtgcaggggctaaattgcttgaacctgatggctataaaacc
acttcctatggctccgagaagacatcacctttggagtggccccatgtaaataaaggatct
agtatgaacttggatattaagcagcctgccaatatggctgttcaatcttcatggaagtat
aacaatgatcgtaatcaaattgacaaccagttccagaagttgtctctcaatataccactt
ccaaataaagaaacattgtctagacactcgtttcttggtcctaatggtctacgaggccag
tggcttggacctagtgctgagataaacgttcaatatccaagcaatatggacttggttcct
gcagaaaattcagggccaaatcaggctggacaatacggtcctttggctgtaaaagatggt
gatccaggacaggttggttctgcaatggagtcagtgctctccttagatgatggtcgatgg
ttacagcctgctgagggttcgtgtcaccctttgattaccgaagcaaaggaggaccctttc
cagtttgtcagtatcaaacaaccattgcctcctcctgttcttgctcaagtgcagcaagac
tttactccaatacctccatcaagagtggctgatccaagacctggtccagcaaagccatct
gaggatggaatgccaaacactaattcatatcagcatttacatgttccagtacgcatgatg
gaggatttcttacgactagctcggtcaaatacagaaaaaaatttggaaacatgtggtgtt
ctagcgggatcattgaaaaacagggctttccatatcaccacacttataatcccaaagcag
gagtccacttcagattcgtgttcaacattaaatgaagaagaaatttttgaagttcaagat
aaattgtctctgtttccactgggttggattcatacacacccaactcagacttgtttcatg
tcatcggttgatcttcacactcattactcatatcagattatgttaccagaagcaattgca
attgttatgngccctaccgatacatccagcccacatggtatctttcatctgtccgatcca
ggcggtgtgtccatcattcgtaattgtcaacaacgaggatttcatccgcatgaggagcct
ttagatggaacaccaatctatgagcattgctctcatgtatttatgaacccaaagataaag
ttcgacgttgttgatctccggtga
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