KEGG   Gossypium hirsutum (upland cotton): 107888994
Entry
107888994         CDS       T04793                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 1
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107888994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107888994
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107888994
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    107888994
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107888994
  Exosomal proteins of other body fluids (saliva and urine)
   107888994
  Exosomal proteins of colorectal cancer cells
   107888994
  Exosomal proteins of bladder cancer cells
   107888994
SSDB
Motif
Pfam: VPS28 GDH_C DAHL
Other DBs
NCBI-GeneID: 107888994
NCBI-ProteinID: XP_016668762
UniProt: A0A1U8HXU3
LinkDB
Position
A09:complement(60096022..60097644)
AA seq 209 aa
MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLA
STLKDTVPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAAASATTSAAIVAECVQN
FITAMDSLKLNMVAVDQVYPLLSDLSASLNKLGILPPDFEGKIKMREWISRLAKMGAADE
LTEQQARQLHFDLESSYNSFMAALPNAGT
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaggttaagctatggaacgacaagcgcgagagagaaatgtatgagaattttgcagag
ctgtatgccattatcaaggcaacagagaagcttgaaaaagcttatgtgagggatattatt
tcatcatctgaatatgagactgaatgccaaaagcttattgcccatttcaagaccttggct
tcaacactcaaagatacggtccctagtattgaacgttttgcagatacatataaaatggac
tgtccggccgctataaatcgtttggtgacctctggggtgccagccacggtggagcaccgg
gccgcggcagctgcctcagcgactacctcggctgccattgtggctgaatgtgtgcagaat
tttattactgccatggattcattgaaactcaacatggtggctgttgatcaagtatatcca
ttgttgtctgacctctcagcatcactcaataagcttggtattttgccacctgatttcgag
gggaagatcaaaatgagggaatggatttcaaggttggctaagatgggggcagcggatgag
ttaacagaacagcaagctaggcagctccattttgacttggaatcttcatacaattcattt
atggcagctttgcctaatgctggtacttga

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