Gossypium hirsutum (upland cotton): 107889003
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Entry
107889003 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase AIRP2-like isoform X1
KO
K25840
E3 ubiquitin-protein ligase AIRP2 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107889003
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107889003
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107889003
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_4
zf-rbx1
zf-RING_10
zf-UDP
zf-C3HC4_4
zf-ANAPC11
zf-RING_16
MTNAP1_ZnF
RING_ZNF598
Motif
Other DBs
NCBI-GeneID:
107889003
NCBI-ProteinID:
XP_016668778
UniProt:
A0A1U8HXV6
LinkDB
All DBs
Position
A09:60209065..60212522
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AA seq
249 aa
AA seq
DB search
MYIGSMRKSFKDSLKVLEADIQHANTLCRASDFPREYDGECLQMRMSYSPAAHLFLFLVQ
WTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTED
KKQKAVCMERYRRNEDEEYRQLIDVDVEREEECGICMELNGKIVLPNCSHAMCLKCYREW
RTRSQSCPFCRDSLKRVNSGDLWVFTDSRNIIDMATVTRENLRRLFLYIDKLPLIVPDTI
FDTYDSHLR
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtatataggttccatgcgaaagtctttcaaggactctcttaaagtacttgaagctgat
attcaacatgccaatactctgtgcagggcttctgattttccaagggaatatgacggtgaa
tgccttcaaatgagaatgtcatacagtccggctgcacacctcttcctattcttggtgcag
tggactgactgtcaccttgcaggtgcactcgggctgttaagaatcttaatttacaaggtt
tatgttgatggtactaccaccatgtctacacatgaaaggaaagcaagcataagggagttc
tatgctgttatctatccctctttactgcaacttcagaggggtgtcactgataccgaagat
aaaaaacagaaagcagtgtgcatggaaaggtaccgaagaaatgaagacgaggagtataga
cagcttattgatgttgatgttgaaagagaagaagaatgtggaatatgcatggagttgaat
ggtaaaattgtgctaccgaactgcagtcatgccatgtgcttgaaatgttaccgtgaatgg
cggactagatcacagtcatgccctttctgtcgtgacagtctaaagagagtaaactccggg
gatctctgggtatttaccgacagccggaatataattgacatggccaccgtgacaagggag
aaccttagaaggcttttcctgtatatagataagttgccactaattgtccctgataccatt
tttgatacttacgattcccacctaaggtga
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integrated database retrieval system
