Gossypium hirsutum (upland cotton): 107889086
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Entry
107889086 CDS
T04793
Name
(RefSeq) protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107889086
03036 Chromosome and associated proteins [BR:
ghi03036
]
107889086
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107889086
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107889086
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107889086
microRNA pathway
RISC loading complex
107889086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoMid
ArgoL2
Piwi_N
Motif
Other DBs
NCBI-GeneID:
107889086
NCBI-ProteinID:
XP_016668878
UniProt:
A0A1U8HY54
LinkDB
All DBs
Position
A09:63226557..63232745
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AA seq
991 aa
AA seq
DB search
MSGRGGGGRGSGRGGGRGGRGRGQGHGRGQPSQSSSRGGRGGGGGRARGRGSSGSTATYN
PLPPQMAPAQQPPQTAPAQPPPQMAVAPPVPPSVAPFSHPPSSSGVGSLSREVSEKLTME
PVAVTTAAPVLPSSSKAIRFPPRPGFGTVGTKCRVRANHFLVDVANADLHHYDVTITPEV
TAKKVNRAIMKQLIDVYKESHLGRRCPAYDGRKSLYTAGPLPFESKELVIKLTEEDRSDG
SSRPARKEQQFKVAIKLASKPDLHYLREFLSRRHFECPQEVIQVLDVVLRSKPSQIYTEV
GRSFFDTSLGPRGDLGNGIEYWSGYYQSLRPTQMGLSLNIDVSARSFYEPILVSEFVAKH
FRGTNLSKPLSDQDRIKVKKALKGVRVKLIYMNYAKTCKINGVSRDPISQLTFTLDDKRT
NVSVVKYFREKYNVVLKYPSLPALQSGSEARPVYLPMELCSIVEGQRYTKKLNEQQVRSL
LRATCQRPNVREGNVTKMVQINNFEVEELVTKEFGMHVRRELALIDARVINPPALKYHES
GRDKIVNPSCGQWNMINKKMVNGGKVDFWTCVNFSAEFWNISEDFCAELVKMCNSKGMVF
RQTPSIAMRSARSDRIDQTLMDVYKESAGLNKPLQLLIIILPDKTGSYGKIKRICETELG
IVSQCCKPVQASKFSNQYFENVALKINAKVGGRNTVLNDAILRRIPLVTDVPTIIFGADV
THPPPGEDSSSSIAAVVASMDWPEVTKYRGIVSAQTHRVEIIQDLYKQTKDPQKGLVEGG
MVRELLLAFFKSTRQKPSRIIFYRDGVSEGQFSQVLLYEMDAIRKACSSLQEGYMPRVTF
VVVQKRHHTRLFPTDRNKTDRSGNILPGTVVDTSICHPTEFDFYLNSHAGIQGTSKPTHY
HVLFDENGFTADILQVLTNSLCYTYARCTKSVSIVPPAYYAHLAAFRARYYIEDEMSDSG
STGGRKPKDKVVEVRPLPSIKDNVKEVMFYI
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcgaggtggtggtggacgtggcagtggtcggggtggtggtcgtggtggacgt
ggccgggggcagggccatggtcgcggtcaaccttcacagtcttcctctcgtggcggccgc
ggtggcggcggcggtagagcaagaggccgtggatcatctggttctactgcaacttataac
ccccttcctcctcagatggctccggctcagcaacctcctcagacggctccggctcagcca
cctcctcaaatggctgtagctccgccagttcctccatcggtggcccctttttctcatcct
ccttcaagttctggtgtaggatcactttccagagaggtatcggagaagcttacaatggag
ccggtggctgtgactacggcggctcctgttcttccgtcgtcgtcgaaggcgattaggttc
ccgccaagacccgggttcggcacggtcggtacaaaatgtcgggttagagccaaccatttt
ctcgtagatgttgctaatgccgatcttcatcactacgatgttactataacgcctgaggta
accgcaaaaaaggttaacagagctataatgaagcaacttattgatgtatacaaagagtcg
catcttggacgtaggtgtccagcttatgatggcaggaagagtttgtacactgctggtcct
cttcccttcgagtcaaaggagcttgttatcaagctaactgaggaagatcgcagtgatggt
tcatctaggcctgcgcggaaggagcaacaatttaaggttgcaatcaaactggcctccaag
ccagaccttcattatctgagggagtttttgagcagaaggcattttgaatgccctcaagaa
gttattcaagttctggatgttgttcttagatctaaaccatctcagatatatactgaggtg
ggaaggtctttttttgatacatcattaggtcctagaggagatcttggtaatggaatagaa
tactggtctggatattatcagagtcttcgacccactcagatgggtttatctcttaatatt
gatgtgtctgctcgatcattctatgagccaattttagtttcagagttcgttgcgaaacat
ttcagaggaacaaacctgtcaaagccgctgtctgatcaagatcgtattaaagtgaaaaag
gccttgaagggagtaagagttaagctcatctacatgaattatgccaaaacttgcaagatt
aatggagtatctagagatcctataagccagttgacatttactctcgatgacaagagaaca
aatgtctctgtggtcaagtatttccgtgagaaatacaatgttgtgcttaaatatccatcc
ttgcctgcacttcaaagtggaagtgaagcaagacctgtctacctgccaatggagctgtgt
agtatcgttgagggtcagagatacacaaaaaaactaaatgaacaacaagttagatctctg
cttagagcaacttgtcaacgtccgaatgttagggaggggaatgttacgaagatggtccag
atcaataattttgaggtggaggagcttgttactaaagaatttggaatgcatgttcgcaga
gaactggcgttgattgatgcacgagttataaatcctccagcgctaaagtatcacgaaagt
ggacgtgacaaaattgttaatcctagttgtgggcaatggaacatgatcaacaagaaaatg
gtcaatgggggtaaagtcgatttctggacttgtgtgaacttttccgcggaattttggaat
atttcagaagacttctgtgcggagcttgtgaaaatgtgtaacagcaaaggaatggtgttt
cgccaaaccccttcaattgcaatgcgatcagctcgttctgatcgaattgatcagactctc
atggatgtatacaaagagtctgctggcttgaataagccacttcagttgttgatcattatc
ttacccgataagactggttcttacggaaaaataaagcgaatttgtgagacggagctaggt
attgtttcacaatgttgtaagcctgtgcaagcttcaaagtttagcaaccaatattttgaa
aatgttgctctcaagatcaatgctaaggttggggggcgaaatactgtgctgaatgatgct
attttaaggagaattccgcttgtgactgatgtccctacaatcatttttggggcagatgtc
actcatccgccgcctggcgaagactctagttcttctatagctgcagtcgttgcttcaatg
gattggcctgaggtaaccaagtatcgtggaatcgtctcagcacagactcaccgggtggaa
ataatccaggatctttataaacaaactaaggatccacaaaagggtttagttgagggtgga
atggttagggaattgcttcttgctttcttcaagtcgacaagacaaaagccttctagaatt
atcttctatagagatggtgttagtgaaggacaattcagccaagttttgctttatgaaatg
gatgcaattcggaaggcttgttcctcgctacaggaaggatatatgcctcgggttacattt
gttgtggttcaaaagaggcatcatactcgcttattccctactgatcgcaacaaaactgat
aggagtggcaatatattaccaggtactgttgtggatactagcatctgtcatccaactgag
tttgatttttatctcaatagtcacgctggcatccaggggacaagcaagcccacacattac
cacgttttgtttgatgaaaatggcttcactgctgacatcttgcaagtgctcacaaacagt
ttatgttacacgtatgcgaggtgtaccaagtctgtttccatagtgcctccggcatactat
gctcacctcgctgcttttagggcacgctattatattgaggatgagatgtcggatagtggg
tctactggaggccgaaagccgaaagacaaggttgtagaggttaggccgctccccagcata
aaggataatgtgaaggaagtgatgttctacatctga
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integrated database retrieval system
