Gossypium hirsutum (upland cotton): 107889227
Help
Entry
107889227 CDS
T04793
Name
(RefSeq) GTPase LSG1-2
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107889227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107889227
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
GTPases
107889227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
GTP_EFTU
Dynamin_N
DUF4279
Motif
Other DBs
NCBI-GeneID:
107889227
NCBI-ProteinID:
XP_016669071
UniProt:
A0A1U8HSW1
LinkDB
All DBs
Position
A09:complement(66801947..66806900)
Genome browser
AA seq
591 aa
AA seq
DB search
MGKNEKSGVGRALVKHHNAMIQQSKEKGRFYKSQHKKVLESVTEVSNIDAVIEQVEEADQ
LFSIHHPTPNPLINLDVSSSISDMTPEERREQQKKEEALHASSLRVPRRPPWTAAMSVEE
LDANEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERCDLLVMVVDARDPL
FYRCPDLEEYAKEIDKHKRTLLLVNKADLLPVSMRKKWAEYFRLHKVLFVFWSAKAATAE
LEGKLLTDHWKMENNMRKSDDPETKIHGRDELLARLQYEAEEIVKMRKSGSDTSTSSNIY
SPRNNAEGTSAPKSVMVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDE
LILCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHREAVQVVANRVQRHVIEDVYKIKLP
KPKPYESQSRPPQASEFLRAYCASHGYVASSGLPDETRAARQILKDFIDGKLPHYEMPPG
MSAEDGEEDDGNPSLSEVLKSDASDVEDSLENGTETTPVFEHVLDDLSSFDLANGLVSKK
ATVKKSNESRKHHKKPQRKKDRSWRVGNDDEDGMPVTRVFQKPVNSGPLNV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaacgagaagtcaggggtagggagagccctggtgaagcatcacaatgcaatg
atacagcaatccaaagagaagggaaggttttataagagccaacataagaaagtattggaa
tcggtaaccgaagttagcaacatcgatgctgtcatcgagcaggttgaggaagctgatcaa
cttttctctatccaccaccccacccctaaccccctcatcaatttggatgtgagctcaagc
atcagcgatatgacacctgaagaaagaagagaacagcagaagaaagaggaagcactgcat
gctagtagtctccgagttccgcgcaggccaccatggactgcagcaatgtctgttgaagag
ctagatgccaatgagaagcaagcgttcttagtttggcgccggagcttagcaagactcgag
gagaatgaaaagcttgttctcactccatttgagaagaacttggatatctggaggcagctt
tggcgggtccttgaacgctgtgatttgcttgtgatggttgttgatgcaagggaccctctg
ttttaccgctgtcctgatcttgaggaatatgcaaaagagattgacaagcacaagagaaca
ttgcttcttgtaaacaaggcagatcttctgccagtttctatgaggaaaaaatgggcagaa
tattttcgcttgcataaggttctctttgtattctggtctgctaaagctgctactgctgaa
ttagaaggaaaactgcttactgaccattggaagatggaaaataatatgcgaaagagtgat
gatcctgaaacaaaaatacatggtagagatgagctcttggctcgtttgcagtacgaggca
gaggaaatagtcaaaatgaggaaatcaggctctgatacctccacgtcatccaatatttat
tctcctagaaacaatgctgaaggaacttcagcaccaaaaagtgtgatggtgggatttgtg
gggtatcctaatgttgggaaaagctcaactataaatgctttggttgggcagaaacgtaca
ggtgtcacctccactccggggaagacaaagcatttccagacgttaataatttctgatgag
ctgattctatgtgattgtcctggattggtgtttccatccttctctagctcaagatatgag
atgattgcttcgggggtgttgccaattgacaggatgacggaacacagggaggctgtgcaa
gttgttgctaatagggtccaaaggcatgttatcgaggatgtatacaagattaaattaccc
aaacccaagccatatgaatcacagtcacggccacctcaggcctcagagtttctgagagct
tattgtgcttcgcatgggtatgttgcctctagtgggctacctgatgaaactagggcagct
cgccaaattttaaaggatttcattgatggaaagctgcctcactacgaaatgccacctggt
atgtctgctgaagatggggaggaagatgatgggaacccgagcctgtctgaagttctcaag
tcagatgcatctgatgttgaagattctttggaaaatggaactgaaactacacctgtgttc
gagcatgtactagatgatcttagctcctttgaccttgccaatggacttgtttccaagaag
gcaacagttaagaagtcgaatgaatcccgtaagcaccacaaaaagccccagcggaagaag
gatcggtcatggagagttgggaatgatgatgaggacggaatgccagtaacccgagtcttc
cagaagccagtgaattcgggtcctcttaatgtttaa
DBGET
integrated database retrieval system