Gossypium hirsutum (upland cotton): 107889253
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Entry
107889253 CDS
T04793
Name
(RefSeq) syntaxin-71-like isoform X1
KO
K08506
syntaxin of plants SYP7
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107889253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107889253
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25[C] (Qc)
Syp7
107889253
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
CCDC90-like
DUF4718
Ran-binding
Motif
Other DBs
NCBI-GeneID:
107889253
NCBI-ProteinID:
XP_016669104
UniProt:
A0A1U8I0B9
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Position
A09:67696417..67698812
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AA seq
294 aa
AA seq
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MTVIDILFRVDEICKKYDKYDPEKQREANAFLDDAFARLYSLVEADIEKALAVRFLFSYP
FLFLFSFQTLIFQINYWNKMQKSDKVSTEKNRAAAVALSAEIRRIKARLMEEVPKLQKLA
KKKVKGHSKEDHETRFDMVLALPDRIKAIPDGSTAAASESGGWGTSSSNKKVKFDSSEER
FGSDFYQQTEESDQFRQEYEMRKMKQDEGLDVISEGLDTLKNIALDMNEEIDRQVPLMDE
IETKVDKTTSDIRKNNVRLKKTITQIRSSRNFCIDIILLCIILGIAFYLYNALK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaattgatatcctattccgagtcgatgaaatctgcaagaaatatgacaagtac
gatcccgagaagcaacgcgaagccaatgcctttctcgacgatgccttcgctcgcctctac
tctctcgttgaggccgacatcgaaaaggctctcgctgttcgcttccttttttcttatccc
ttcctttttttgttttcttttcaaacattgatttttcaaattaattattggaataaaatg
cagaaatctgacaaggtttctacggagaagaatagagcagcggcggtggcattgagcgct
gagattcgtcggataaaggctcgattgatggaggaagttcctaagcttcaaaaattggct
aaaaagaaggtgaagggacattccaaagaggatcacgaaactcgtttcgatatggttcta
gcgctacctgatcgaattaaagccattcccgatgggtctacggctgcagcaagcgagagc
ggtggatggggaacttcatcatccaacaaaaaagtcaaatttgattcatcagaggagcgc
ttcggtagtgatttttaccaacaaactgaagagtcagatcaatttagacaagaatatgaa
atgagaaaaatgaaacaggatgaaggtcttgatgtgatatcagaaggtctggatacactg
aaaaatatagctcttgacatgaatgaggaaatagatagacaagttcctctaatggatgaa
attgagacaaaggttgacaagacaacatctgatattcgaaagaataatgttagactgaag
aaaaccattacccagataagatccagccgaaatttctgcattgacattattctgctgtgt
atcattctagggattgctttctatttgtacaatgcactgaaatga
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