Gossypium hirsutum (upland cotton): 107889291
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Entry
107889291 CDS
T04793
Name
(RefSeq) hydroxyproline O-arabinosyltransferase RDN1
KO
K20782
hydroxyproline O-arabinosyltransferase [EC:
2.4.2.58
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
107889291
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ghi01003
]
107889291
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.58 hydroxyproline O-arabinosyltransferase
107889291
Glycosyltransferases [BR:
ghi01003
]
O-Glycan biosynthesis
O-linked Ara type
107889291
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPAT
PEPCK_N
BTB_BTBDG
Motif
Other DBs
NCBI-GeneID:
107889291
NCBI-ProteinID:
XP_016669145
UniProt:
A0A1U8HSZ5
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All DBs
Position
A09:68221730..68226153
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AA seq
358 aa
AA seq
DB search
MKRVSPLFLVLLVLGFFFATYNLLTMIIHYKTSTSEQWDLSNPFIQMPGNLMEGGGSKKY
HVALTATDAPYSQWQCRIMYYWYKKVKEMPGSDMGKFTRILHSGKPDNLMEEIPTFVVDP
LPQGLDRGYIVLNRPWAFVQWLEKAMIDEEYILMAEPDHVFVNPLPNLARGKHPAGFPFF
YIKPSDHEHVIRKYYPEEKGPVKNIDPIGNSPVIIRTSVLEKIAPTWMNISLRMKDDPVT
DKAFGWVLEMYAYAVASALHDVHHILHKDFMLQPPWDTEVGKKFIIHYTYGCDYNLKGEL
TYGKIGEWRFDKRSYLSGPPPRNLSLPPPGVPESVVRLVKMVNEATENIPNWDTLNRG
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgtttcgccgctctttttggtacttttagtccttggattcttctttgcaaca
tataatttgttgactatgataatacactataagacatctacttcagagcaatgggatttg
tccaatccttttatacaaatgcctgggaatttgatggaaggtgggggttctaaaaagtac
cacgttgctctcacggcaacggatgctccgtatagccaatggcagtgtcgaattatgtat
tattggtataagaaggtaaaagagatgcctggatcagatatgggaaaattcactcgaatt
ttgcattcagggaagcccgacaatttgatggaggagattccaacttttgttgttgatcct
cttccacagggtttagatcggggttacattgtcttaaatagaccatgggcttttgtgcaa
tggctggaaaaagcaatgattgacgaagaatacattctaatggctgaacctgaccatgta
tttgtaaatcctttgcctaacttggctcgtggaaaacatccagcagggtttcctttcttt
tacattaagccgtctgaccacgagcatgttattaggaagtattatcctgaggagaagggt
cctgtgaagaatatcgatccaattggcaattctccagtgattattagaacgtctgtgctg
gagaaaattgcacctacatggatgaatatttctttgaggatgaaagatgacccagtgact
gacaaagcatttggatgggtgctagaaatgtatgcatatgctgtggcatctgcactgcat
gacgtgcaccacatacttcataaagacttcatgctccagccaccatgggatacggaagta
gggaagaagtttataatccattatacttacggatgtgactacaatttgaagggagaatta
acgtatggaaagattggagaatggcgtttcgataagagatcgtaccttagtgggcctcct
ccaaggaacctctctttgccccctccaggtgttcctgaaagtgtggtgagacttgtgaag
atggtgaacgaagctacagagaatattcccaattgggatacactaaatcgtggctga
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