Gossypium hirsutum (upland cotton): 107889372
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Entry
107889372 CDS
T04793
Name
(RefSeq) flowering locus K homology domain isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107889372
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
107889372
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_Vigilin
RemA-like
LED_rpt
KH_KhpA-B
Plasmodium_HRP
Motif
Other DBs
NCBI-GeneID:
107889372
NCBI-ProteinID:
XP_040937584
LinkDB
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Position
A11:107542921..107548824
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AA seq
533 aa
AA seq
DB search
MAEVGQSYGENEVEQVQEHGDLEQNLNLGHDLNLEHSANLEQNANLEHIANLEHMANLEH
NANLEHIANLQQIANLEHIANLEHNANLEHSVDSEQNLNLEEEPEENLEEHKLQQESQHQ
PKQDHENEAVVGGGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
LDGPPGTQERAVMVSGKEEPDSSLPPAMDGLLRVHKRLIDGLEGDSSHAPSAVGTKVSTR
LLVPAPQAGSLIGKQGTTVKTIQESSNCIVRVLGSEDLPVFALQDDRIVEVVGEAADVHK
ALELIASHLRKFLVDRSIIPLFEMHMQKSNPQMDHMPPRQTWAPPQGVPPNAGGGGFGHN
PQYMPPPRQLENYYPPADMPPMDKQPHQGISAYGREAPTGAHGSSNPNAPSMITQVTQQM
QIPLSYADAVIGTAGASISYIRRVSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ
NFMAEAAAPAQAQVGGAADQAYNPYAAHGSLYASPPPNPGHAGGYGYGSNYGY
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagttggtcaaagctatggtgagaatgaagtagaacaagtgcaagaacatggg
gacttagagcagaatcttaacctggggcatgatttgaacttggagcacagtgcaaacttg
gaacaaaatgcgaacttggagcacattgcaaacttggagcacatggcaaacttggagcac
aatgcaaacttggagcatattgcgaacttacagcagattgcgaacttagagcacattgct
aacttggagcacaatgctaacttagagcacagtgtggactcagagcagaacttaaacttg
gaggaagaaccagaagagaacttggaggagcataaattgcagcaggaatcacaacatcaa
ccaaaacaagatcatgaaaacgaggcagtggttggaggtggtgaaaagaagtggcctgga
tggcctggagagagtgttttccggatgttagttcctgcacagaaggttggtagtataatt
ggacgtaaaggggagttcataaaaaaaatagttgaggagacaagagctcgaatcaagata
cttgatggtcctccagggacacaagagagagctgtaatggtatctgggaaggaggagcct
gattcttctcttccgcctgctatggatggacttttaagggtccataaacgccttattgat
ggcttggagggtgattcatctcatgcaccatcggctgtgggaaccaaggtttcaacaagg
ctgctagtccctgccccacaagctggaagtttgattggaaaacaaggaacaactgtcaaa
accattcaagaatcgtctaattgtattgttagagttcttggatcagaagaccttccagtc
tttgctcttcaagatgataggattgttgaagttgtaggagaagcagctgatgtgcataaa
gctttggagctaattgcatctcacctcaggaagtttttagtggaccgcagtataattccc
ttatttgaaatgcatatgcaaaagtctaatcctcagatggaccatatgccacctcgtcaa
acctgggccccacctcaaggtgtccctcctaatgctggtggaggtggttttggacacaat
cctcagtacatgccgcctccacggcaactcgagaattactacccacctgctgatatgcct
cctatggataagcagccacatcagggtatttctgcctatggaagagaagccccaactggt
gctcatggatcatcaaatcccaatgcaccatcaatgatcacacaggtcactcagcaaatg
caaattccgctatcttatgctgatgctgttattgggacagctggtgcaagcattagctat
attcgacgtgttagtggggcaactgtcaccattcaagaaactaggggtgttcctggggaa
atgactgttgaaataagtggtactgcttcacaagttcaaactgctcagcaactgatacag
aattttatggctgaagctgccgcaccagcacaggcacaagttggtggggctgcagaccag
gcttataatccgtatgcagctcatggttctctatacgcatcacctccacctaatccagga
catgcgggtggctatggctatggttcaaactatgggtactaa
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