Gossypium hirsutum (upland cotton): 107889420
Help
Entry
107889420 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107889420 isoform X1
KO
K09527
DnaJ homolog subfamily C member 7
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107889420
Chaperones and folding catalysts [BR:
ghi03110
]
Heat shock proteins
HSP40 / DNAJ
107889420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
DnaJ
TPR_12
TPR_8
TPR_6
TPR_19
ANAPC3
Motif
Other DBs
NCBI-GeneID:
107889420
NCBI-ProteinID:
XP_016669316
UniProt:
A0A1U8HTL4
LinkDB
All DBs
Position
A09:70407147..70419504
Genome browser
AA seq
1440 aa
AA seq
DB search
MSPPAVEFRSQDAFSTNAKPSSAPQNPEPTPHNFTKFPHSNHSQKNLGNAGEFDCGFGFD
SRSGFHSKSAARIRPRLVKVRKQFNGKVRTGECEVDSGFNPFKHSGQGSRPVGTSGNPSS
SESMNRVNSDNSNNNISDNNNSSFVFGANNGSDRESSGHAEVENRNEEPLGKFETVDFVF
GADLRGGMEKLGSEKCEQFGFVFGANGSDGRVKLNPEKGESSDSSVSLDGCEGKIKLETG
LQGSNNSNLDFTFGSSKSNLASNLDLEKPDFGESLKVPDFCAAGFVFGSSQSDLKPTFSS
HKIEPTNVVGGSSSTFGASNLNSSSFILERRSGENLGQPICSDFGKMNVEGETRSQKMEP
SAVNFNANGSESWIGNSANSFFVFGATSYKSSSNECKDGINSSSEKFGVSARNVQYKDAF
ESGNCFGSSSWANSVFILEHDLDKLNISSSKNIGGTNSTRDSDTEANPEAICLSGNVNGA
ASCNKNNVGISDSEPFTFKAGIDKTSDIGNSFQGHVKDDLELNGTDAWSSLNLNSQVNTG
VINAALVGTERNDENCSIGTLDQSEISSSDFRTPKWNPSSFKENLFPEVDRKLEFGVKSS
LTKEKRSKKMRGKSRKSSLHKHWTQQYNVPQESSSQENQDSSQCYSPMDFSPYQEIAEAD
QLPKESAQDEGDQKCSKPNKENFGYDHQRTFFGDGPSREPVCESETAPSAFKSDCFSSSS
AAGIAGAEGLNGTQENKQRTESCFSSGMEDERKFTFSATSTSGQGSLSLRKRQLRNKSKV
KIGNASFTITSVLDVQGGSSSVQFSPCDPVECEQKDKFTHHSKEENDQFKQRSNSFTAAV
HEACEMWRLRGNQAYRNENLSKAEEFYTQGINSVSTNETSGCSVKPLVLCYSNRAATRMS
LGRIREALADCLMAAALDPNFLKVNVRAGNCYLLLGETDNAIRYFNKCFSSGADVCLDRR
IRVDAADGLQKAQRVDELTKHSAILLEEKSSNAASSALDAISEALSISSRSEKLLEMKAE
ALYMLKKYEEAIQLCEQPLYVAQNSSSEAEIDKQITSTDGCGCYSIAMLWRGHLMSKSYF
YMGKLEKALELLQKLEHVGSWKDEHGSKILEMSVSLAVTIRELLRLKTAGNEAVCSGRYT
EALEHYTLALSSNVESRPFAAICFCNRAAAHQALGQIADAIADCSLAMALNENYTKGNWL
EACFSHCSPEGRSISGNSLGAGSLRRLSWPNEAFSRRASLHEMIRDYGQASSDLQRLISI
LEKQCDKTSHQSGTKDKSTGNLKELRQAQRRLSSVQEEAKREIPLNLYLILGVKPSDSTS
DVKKAYRKAALRHHPDKAGQFLARSETGDEGQLWKEIAEEIHKDADRLFKMIGEAYAVLS
DTEKRSEYDLEEEIRKTPIKSKSNAYERARDDYGYHYERSSSRRYWRGNWNDYKNSHSRW
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgcccgccgtcgaatttcgatcacaggatgccttctctaccaatgctaaaccc
tcttccgctccacaaaaccctgagcctacaccccacaatttcactaaatttcctcactcc
aaccattcccaaaagaatctcggaaatgcaggggagttcgattgcggcttcggttttgat
tccaggagcggctttcattccaagtccgccgctcggataaggccgaggttggtcaaggtg
aggaagcagttcaatgggaaggtgagaactggggagtgcgaggtcgactccggtttcaac
ccatttaagcattctggtcaaggatcgcgtccggtaggcactagtggtaatccatcatcg
tctgagagtatgaatagagtgaacagtgataatagcaataataatattagcgataataat
aattcaagttttgtatttggtgctaataatggaagtgatagagaatctagtggacatgct
gaggttgagaatagaaatgaggagcctttgggcaagtttgagactgtagattttgtattt
ggagcagatttgcgcggtggcatggagaaactgggttctgaaaagtgtgagcagtttggt
tttgtttttggtgctaatgggagtgatggacgggtgaagttgaatccagaaaagggagaa
tccagtgattcttccgtgagtttggatggctgcgaggggaagataaaattagagactggt
ttgcagggcagtaacaatagtaatttagatttcacttttggttcgagcaagagtaattta
gcttccaatttggatttggagaagccagactttggtgagtctctcaaagttcccgatttc
tgtgctgctggttttgtgtttggttctagtcagagtgatttaaagccgactttcagttct
cataagattgaacctactaatgttgtgggggggtcgagttctacttttggtgctagtaac
ctcaattcatcctcatttattttggaaaggagatctggtgaaaacttaggacaaccaatt
tgtagtgatttcgggaagatgaatgtggagggtgaaacaaggtcacaaaaaatggaaccc
tctgcagttaatttcaatgctaatggaagtgaaagctggattgggaatagtgctaatagt
ttctttgtgtttggtgctacaagctataaaagctcctctaatgaatgcaaagatggaatc
aattcaagcagtgaaaaatttggtgtttctgctagaaatgttcagtataaggatgctttt
gaaagtggcaattgttttggtagttcttcttgggcaaactcagtatttatactggaacat
gatctagataaactaaatatcagttcttctaaaaatattggtggtactaattcaactagg
gattcagatacagaagcaaatcctgaggcaatatgtctctctggtaatgtgaatggtgct
gcttcttgtaataaaaataatgttggaatctctgattccgagccatttacatttaaggct
ggtattgataagacttctgacattggaaattcttttcaaggtcatgttaaagatgattta
gagctgaacgggactgatgcatggtcatcgctcaatctcaactcacaagtaaatactggt
gtaattaatgcagcattggtcggtactgaaaggaatgatgaaaattgctcaattggcact
ctagatcaatcagaaatttcatccagtgattttagaacacccaaatggaacccttcttcc
tttaaagagaatttattccctgaggtagataggaaattggaatttggtgtaaaaagcagc
ttaaccaaggagaaaagatcaaagaaaatgagaggaaagtcaaggaaatcttccctgcat
aagcattggacccagcaatataatgtgccacaggaaagcagttcacaagaaaatcaagac
tcctctcaatgttattcacccatggatttttctccttatcaggaaattgcagaagctgat
caattaccaaaggaaagtgctcaagatgaaggtgatcagaaatgcagtaagccaaacaaa
gagaattttgggtatgatcatcagagaactttttttggtgatggtccttcaagagaacca
gtttgtgaatctgaaactgcccccagtgcgttcaaatctgactgtttctctagtagcagt
gctgctggcattgctggagcagaaggcctaaacgggacccaagaaaacaaacagagaaca
gagtcttgttttagttcaggcatggaagatgagagaaagtttactttttctgcaacctca
acttctgggcaaggtagtttgtcattaagaaagcgccagcttcgaaataaaagtaaggtc
aaaattggtaatgcttcatttaccataacatcagtcctggatgttcaaggagggtcttcc
tctgtccaattttcaccttgtgatcctgtagaatgtgagcaaaaagataaatttacacat
catagcaaagaggagaatgatcagttcaaacaaaggtctaactcctttactgctgcagtc
catgaagcctgtgagatgtggcgactcaggggaaatcaagcttatagaaatgagaatttg
tctaaagcagaggaattttacactcagggaatcaactctgtctccacaaatgagacttca
gggtgctctgtcaagcctcttgttctttgctatagcaaccgtgcagccactcgtatgtct
cttggaaggataagggaagctttggcagactgtctgatggctgctgctcttgatccaaat
tttctgaaagttaatgttagagctggcaattgttaccttctgctgggggaaactgacaat
gccattcgatatttcaataagtgcttcagttcaggagctgatgtgtgcttggatcgccga
attagggtagatgctgcagatggcctccaaaaagctcagagagtggatgaacttacaaaa
cattctgcaatacttttggaagaaaagtcatccaatgcagcatctagtgcattagatgca
atttctgaggccttgtctattagttcacgttctgaaaaattgcttgaaatgaaggcagag
gctctttatatgcttaagaaatatgaagaagcaattcagttgtgtgaacaacctctttat
gttgctcaaaatagttcttctgaagcagagatagacaaacaaataacaagcacagatggt
tgtgggtgttattctattgcaatgctgtggagggggcacttgatgtccaagtcatacttc
tatatgggcaagcttgaaaaggcacttgaattacttcagaagcttgagcacgtgggatct
tggaaggacgagcatgggagcaaaattttagaaatgtcagtttcattggctgttaccatt
cgagaacttttgcgccttaagactgccgggaatgaagcagtttgttctggtaggtataca
gaagctctagaacactacacacttgctttgtcaagcaatgttgaatcacggccttttgca
gcaatatgcttttgtaatcgtgctgctgcacaccaagctttgggtcaaattgctgatgca
attgcagattgcagtctagcaatggcccttaatgaaaattataccaagggaaactggttg
gaagcatgtttttctcattgctcccctgaaggtcgaagtatttctggcaactcattaggt
gcaggttccctacgaagactgagttggccaaatgaggcattttccaggagagcatcatta
catgagatgatcagagactatggacaagcatctagcgatcttcaaagacttatctcaatt
cttgaaaagcaatgtgataaaacatctcaccagtctggcactaaggataaatctactgga
aacttaaaagagttaaggcaagctcagcggcggttatcatctgtgcaagaagaagctaaa
agagaaatccctttaaatttatacctcattttgggagttaaaccatcggactccacatct
gatgttaagaaggcataccgcaaagcagctcttaggcatcacccagacaaggctggtcaa
ttcttggcaaggagtgaaactggagatgaggggcaactctggaaggaaattgctgaggaa
attcacaaggacgctgacaggctgtttaaaatgattggagaggcatatgcagtactatca
gatactgagaagcggtcagagtatgatcttgaagaggagatcagaaaaactccaatcaaa
agcaaaagcaatgcatatgaaagagcaagagatgactatggctatcattatgagaggagt
tcaagcagacgatattggcgggggaattggaatgattataagaattcacattctcgatgg
tag
DBGET
integrated database retrieval system
