KEGG   Gossypium hirsutum (upland cotton): 107889597
Entry
107889597         CDS       T04793                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107889597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107889597
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107889597
Spliceosome [BR:ghi03041]
 Complex B
  Other components
   Prp19 complex
    107889597
 Complex C
   Prp19-CDC5 complex
    107889597
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    107889597
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 107889597
NCBI-ProteinID: XP_016669569
UniProt: A0A1U8I1M2
LinkDB
Position
A11:complement(106902278..106907756)
AA seq 961 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLEQYEKLLDAACARDENYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDTRQRKRKRKGIDYNAEIPFEKRPPXGFYDVADEDRPVEQPKFPT
TIEELEGKRRVDIEAQLRKQDIAKNKIAQRQDAASAILQANKLNDPEAVRKRSKLMLPEP
QISNHELEEIAKMGYASDLLAGNEELAEASSATRALLSNYSQTPRQGVTPLRTPQRTPAG
KGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKRQVQTPNPMLTPAATPGGT
GLTPRIGMTPSRDGYSFGLTPKGAPIRDELHINEDMDLHDSVKLEQQRQADIRRNLRSGL
GSLPQPKNEYQIVIQPPPEESEEPEEKIEEDMSDRIARERAEEEAQQQALLKKRSKVLQR
ELPRPPSASLELIRDSLMRTDGDKSTFVPPTLFEQADEMIRKELLSLLEHDNAKYPLDEK
ANKGKKKGAKRSANGSIPSIEDFEEDEMKEADSWVKEEAEFLRVAMGHENESLDDFVEAH
NTCLSDLMYFPTRHAYGLSSVAGNTEKLAALQSEFDHVKKKMDNDKLKAEGMEKKFNVLT
QGYERRAATLWRQIESTFKQIDTAGTELECFQALQKQEQLAASHRINGLWEEVQKQKELE
QTSQSRYGNLIAEIERIQKIMNVYRVQAQKQAEAAEKDHALESSEAPASQAAVPSSGLSE
PAPSSEDVYSSLDGQPSLKIDMNVDSQEQHATMDLETGGNISGNVPLVVEDNGDNITKTP
AQDAGTSSEVVAESVNPDTVSTKPESIEEALEGEGFTDHAKIDSTCVLGGDTAENQTAME
E
NT seq 2886 nt   +upstreamnt  +downstreamnt
atgaggattatgataaaaggaggagtatggaagaacacggaggatgagatattgaaagcg
gcggttatgaaatatgggaagaatcaatgggcccgaatttcttctttacttgttcgtaaa
tctgctaagcaatgtaaggctcgttggtatgaatggcttgacccttcaatcaaaaagacc
gagtggacaagagaagaggatgaaaagctgttgcatctcgcaaagctcatgccaacacaa
tggagaacaattgctccaattgttggtcggactccatctcaatgtctagagcaatatgag
aaactccttgatgcagcttgtgctagagatgaaaattatgagcctggtgatgaccccagg
aaattacgtcctggagagattgatcctaaccctgaatcaaaacctgcacgaccggatcct
gttgatatggatgaggatgagaaagaaatgctttctgaagctcgtgcccggttagctaat
actagaggtaagaaggcgaagaggaaagctagggagaaacaacttgaagaggctaggagg
cttgcatctttgcagaaaaggagggaacttaaggctgctgggatcgatacaaggcaacga
aagagaaaaagaaagggaattgattataatgctgaaatcccctttgagaagaggcctcct
nccgggttttatgatgttgctgatgaagatagacctgtggaacagcctaagttcccaaca
accattgaagaacttgagggaaaaagaagagttgatattgaagcacagttacggaagcag
gatattgcaaaaaataaaattgcacagaggcaggatgccgcatcggcaatattgcaggcc
aacaagctaaatgatccagaagcagtgaggaagagatccaaacttatgctaccagaacct
cagatatcgaatcatgaactagaggagattgccaagatgggatatgccagtgatcttctt
gctggtaatgaggaactggctgaagcgagtagtgctactcgtgctcttctttcaaattat
tcccagactccacggcagggagtgacacctttacggaccccacaaagaacacctgctgga
aaaggtgatgctatcatgatggaagctgaaaatctggctaggttgagagaatcccaaacg
cctctacttggtggagaaaatcctgagctgcatccttcagatttttctggggtcactcct
aaaaggcaggtccaaacacccaacccaatgttgactcctgcggcaacccctggtggtact
ggtcttactcctcgaattggaatgacaccatcaagggatggctactcttttggtctgacc
cctaaaggagctcccatcagggatgagctccacataaatgaagacatggatctacatgac
agtgtcaagcttgagcaacaaaggcaagctgatataagaaggaacttgcgatctgggctt
ggtagtcttccacagccaaagaatgagtaccaaatagtcattcaaccacccccagaggaa
agtgaagaaccagaggagaaaattgaagaagacatgtctgatagaatagccagagaaagg
gctgaggaagaagcacagcagcaggcattgcttaagaagagatcaaaagtgttgcaaagg
gagcttccaagaccacctagtgcatcactggaactaattagagattctttgatgaggact
gatggagacaaaagtacctttgttcctcctactctatttgagcaggctgatgaaatgata
agaaaagagcttctgtccttgctggagcacgacaatgctaagtatccacttgatgaaaag
gcaaacaaagggaagaaaaagggtgcgaagcgttctgctaatggatctattccgagtata
gaagattttgaggaagatgaaatgaaagaggctgattcgtgggtaaaggaagaggctgaa
ttccttcgtgtggcaatggggcacgaaaatgaatctcttgatgattttgttgaagcacat
aatacttgcctaagtgatctcatgtacttccctactcgtcatgcttatggtctgtcaagt
gttgctggaaatacggagaaacttgcagccctgcagtctgaatttgaccatgtgaaaaag
aagatggataatgataagttgaaagcagaaggcatggagaagaagttcaatgttctcaca
cagggttatgagagacgggctgcaacactttggcgtcagattgaatcaacctttaagcag
attgatactgcaggaacagaactagagtgttttcaagcattacaaaagcaggagcagcta
gcagcttcacacagaataaatggtctgtgggaggaagttcagaaacagaaagagcttgaa
caaacctcacaaagtcgctacgggaatctcatagctgagatagaaaggatacaaaagatc
atgaatgtatacagagtacaagcacaaaaacaagcagaggcagctgaaaaggatcatgct
cttgagtcgtctgaggctccagcaagtcaagctgctgtgccaagctcaggactttccgag
cctgcaccttcctcggaggatgtttactcttctcttgatggccagccaagcctgaaaatt
gatatgaatgttgattcccaagaacagcatgctactatggatttggaaacaggtggaaac
atatctggtaatgtgcctttggttgtggaagacaacggagataatatcacaaagacaccg
gctcaggatgctggaacaagttctgaggttgttgcagaatctgtaaatcctgacacagtc
tctaccaaaccggaaagcatcgaagaagcgcttgaaggtgaaggttttaccgatcatgcc
aagattgacagtacatgtgtcttgggtggagataccgctgaaaaccaaactgcaatggag
gaatag

DBGET integrated database retrieval system