Gossypium hirsutum (upland cotton): 107889611
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Entry
107889611 CDS
T04793
Name
(RefSeq) zinc finger protein JACKDAW-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107889611
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107889611
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
107889611
NCBI-ProteinID:
XP_016669586
UniProt:
A0A1U8HUB1
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Position
A09:complement(75309734..75313220)
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AA seq
450 aa
AA seq
DB search
MSDEAFPAASIGGFIQDPSNANPNPKPNANPAKKKRNLPGTPDPDAEVIALSPKTLMATN
RFICEICKKGFQRDQNLQLHRRGHNLPWKLRQRTNKEVRKKVYICPEKTCVHHDPSRALG
DLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFI
THRAFCDALAEESARLTSVAATSLNFRNDTVNLPHGFASRGVQDVAGIPQFGSGFPQDFS
GMPAPGLSEMVQMAPANLFGSSSHFPGFENGGATSSNSNNLSLSQLPQGLKEEGGNEGNL
MESLSSLYSDNQNKQSKANASPMSATALLQKAAQMGSTRSSPSFFGNSFGVMSSSSSHTA
PTFMASSSASMSAKSNNLDKLMLQTGGKPSEPSLLSMHHPGSNSFAQSLTRDFLGMSNDQ
SPRPFLPQELAKYAAIGSSIGLSQFTSSNH
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgaggcgtttccagctgcttcaataggagggtttattcaagacccaagtaat
gcaaaccctaaccctaaacctaatgctaaccctgctaagaagaagagaaatcttcccgga
actcctgatccagatgctgaagtaattgctttatctccaaaaacacttatggctacaaac
cgattcatatgtgaaatatgcaagaaaggtttccaaagagaccaaaacctgcagcttcac
cgcaggggtcacaatcttccatggaagctaaggcaaagaacaaacaaagaagttcggaag
aaggtttatatttgccctgagaaaacctgcgtccaccatgatccatccagggctcttggc
gacctcactggaataaagaaacatttcagcagaaaacatggtgagaagaagtggaagtgt
gagaaatgttcaaagaaatacgctgttcaatccgactggaaagctcactcgaaaacttgt
ggtactagagagtacaagtgtgactgtgggacactgttttccagaaaagacagctttatc
acccatagagctttttgtgacgccttagctgaagaaagtgcaagactcacttcagttgca
gccacaagcctaaatttcagaaacgatactgtgaatctgcctcatggatttgctagccgt
ggagttcaagatgttgctggcattcctcaatttggttcgggttttcctcaagatttcagt
gggatgcctgcaccaggtttgtccgagatggttcaaatggctccagccaatctctttggc
tcgtcttcacactttcctggatttgaaaacggcggtgcaacttcatcaaattccaataat
ctctccttatcgcaactgccacaaggattaaaagaagaaggtggaaacgaaggcaatcta
atggaaagcctttcatctctctattctgataatcaaaacaagcaatccaaagctaatgct
tcaccaatgtccgcaactgcgcttttgcaaaaagcggctcaaatgggttcaactagaagc
agcccgtccttctttggcaacagtttcggtgtaatgagctcctcttcctctcacacagca
cctactttcatggcatcaagcagtgcatcaatgagtgcaaaaagcaacaatcttgataag
ctcatgttacaaacaggaggcaaaccaagtgagccgagtctattaagcatgcatcaccct
ggttcaaattcattcgctcaaagcttgacgagggacttccttgggatgagcaatgatcaa
tcaccacgtccatttttaccccaagaactagccaaatatgcagcaattggctcaagcatt
ggtctcagtcaattcactagcagtaaccactaa
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