Gossypium hirsutum (upland cotton): 107889683
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Entry
107889683 CDS
T04793
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial-like isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107889683
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
107889683
Transfer RNA biogenesis [BR:
ghi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
107889683
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GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
PepSY_2
PTPS
Motif
Other DBs
NCBI-GeneID:
107889683
NCBI-ProteinID:
XP_016669693
UniProt:
A0A1U8I0F9
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Position
A09:75791986..75799774
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AA seq
795 aa
AA seq
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MMAVRAVNGGSLFRTAASPPLLTFGCRFRQFSSLPFRRNTELGLRFPFFCCGNQFLGYGG
GLSRSVHSLVDCVMEELTAWRSRRRIRATVKLTTSGELLEDKLVNQEIEKGLLLEFKKDS
DRVLLGVAQRPDGKKNWMVYDQNGVTSSIRPQQITYIVPGVENFDHAEISKFLQKAQENL
DPTLLEIAWVELLEKNASVTAEELAEMIFGSSEPLASYCAHLLLSKDEVYFTVLATKGSR
AIYGPRPTGQVHVEELLHKKLAKDAAEKELQDFVQLIVSAKAKPALAKPPKSSWMVDEKI
QYKIESLEAYAIDACKSDEQRKTAGMILKAMGLTKTASSALNLLINIGYFPVHVNLDLLK
LNILTDHSDEIIAAAESLLSDSSDSDEMNREDLTHLKVYAIDVDEADELDDALSATKLQD
GRMKIWIHVADPARYVEPGSMVDREALRRGTSVFLPTGTYPMFPEKLAMEGMSLKQGELC
NAVSVSVILHSDGSIAEYSVQNSIIKPTYMLTYESATELLHLNLEEEAELKILSEAAALR
LKWRRQQGAIDTSTLEACIKVVNPEDLEPSINLYVENQADPAMRLVSEMMILCGEVVATF
GSCNNIPLPYRGQPQSNIDVSAYSHLPEGPVRSSAIVRIMRAAEIDFRKPIRHGVLGLPG
YVQFTSPIRRYLDLLAHYQVKAFLKGETPPFSAGQLEGMASIVNMQVRVVRKLSASSLRY
WIIEFLRRQPREKKYRALILRFIKDRIAALFVVEVGLQASAWVSIGSQVGDEVEVQVEEA
HPRDDVLYLKEVLRN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgttcgcgccgtcaacggtggttctttgtttcgtaccgccgcttcgcctcct
ctgttgacgtttggctgccggttccgccaattcagctccttaccgtttcgccgaaacact
gagttagggcttcgatttccttttttttgttgcgggaatcagtttctaggatatggcggt
ggcctttcgcgttcggttcatagtctcgttgattgcgtcatggaagagctaacagcttgg
cgcagtcgcagaagaattcgcgccactgtcaagctaacgactagtggtgagcttcttgaa
gataaacttgtcaatcaagaaatagaaaagggattgctgctggagtttaagaaggattca
gatagggtattgctcggagttgctcagaggcctgatggaaagaagaactggatggtgtac
gatcagaatggtgtcacatcatctatcagaccacaacaaattacatatattgttccaggt
gtagaaaattttgatcatgctgagatctcaaaatttctccaaaaagctcaggaaaacttg
gacccaacattgcttgagattgcttgggttgagcttcttgaaaagaatgcgtcagtgaca
gcagaagaattggctgagatgatatttggtagttcagagcctcttgcgagctattgtgcc
catcttttgctatcaaaagatgaagtgtacttcactgtgcttgcaacaaagggttctcgt
gcgatttatgggcctcgaccaacaggacaagtacatgtggaagaacttttacacaagaag
cttgccaaggatgccgctgagaaagaacttcaggactttgtacaattaattgtctctgct
aaagcaaagcctgcacttgctaaacctcccaaatcttcctggatggtggatgagaaaatc
caatacaaaattgaatcccttgaagcatatgccattgatgcctgcaaaagtgatgagcaa
aggaaaactgctggaatgatcctgaaggcaatgggactaacaaaaacagcatcctctgca
ctaaaccttctcataaacattggttattttcctgtgcatgtcaatcttgatctgttaaag
ttaaacattcttacagatcattctgatgagattatagctgctgctgaaagtcttctgtct
gattcatctgactcagatgagatgaacagagaggatcttactcatttgaaggtttatgct
attgatgttgatgaggctgatgagcttgatgatgccttaagtgcaacaaagttgcaagat
ggccgtatgaaaatatggatacatgttgcagatccagctagatatgttgaacctgggagc
atggtagacagggaagcactgagaagaggaacctctgttttcttgccaactggcacttat
cctatgtttcctgagaaacttgctatggagggaatgagtttgaaacaaggagaactttgc
aatgcggtcagtgtctctgttatcctgcactctgatggcagcattgcagagtattcagtt
caaaactcgattattaaaccaacttatatgctgacctatgagagtgcaactgagctgctt
catttgaacctggaagaggaggctgaactgaagattctatctgaagcagctgctctaagg
ttaaagtggcgtcgccagcagggtgcaattgatacatccaccctagaagcttgcattaaa
gtagttaacccagaagaccttgaaccatcaatcaatctttatgttgaaaaccaagcagac
cctgcaatgcggcttgtttctgagatgatgatactttgtggagaagttgtagccacattt
ggatcttgcaataacatccctttaccctatagaggacagccacagtcaaatattgatgtt
tctgcatattcacatcttcctgaagggccagttcgaagctctgccattgttagaataatg
cgtgcagctgaaattgatttcaggaagcctattcgtcatggggttcttggacttcccggt
tatgttcagtttacatcacccatccgtagatatttagatctccttgctcactatcaggtg
aaggcatttcttaaaggtgaaactccacctttttcagctggtcagctagaagggatggca
tcaatagtaaatatgcaagttagagttgtaagaaagctctcagccagcagtctccggtat
tggataatagagtttctgagaaggcagccaagggagaaaaaatatcgtgcattgatcctt
agattcatcaaggacaggattgcagccttatttgtagttgaggtgggacttcaggcatct
gcatgggtgtctataggatctcaggtaggagatgaagtagaagttcaagttgaagaagcg
catcctcgcgatgatgttctttaccttaaggaggttcttagaaactga
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