Gossypium hirsutum (upland cotton): 107889857
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Entry
107889857 CDS
T04793
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00531
Glycosaminoglycan degradation
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
107889857
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ghi00536
]
107889857
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
107889857
Glycosaminoglycan binding proteins [BR:
ghi00536
]
Heparan sulfate / Heparin
Enzymes
107889857
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
107889857
NCBI-ProteinID:
XP_016669894
UniProt:
A0A1U8I2J7
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All DBs
Position
A09:complement(3883546..3886514)
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AA seq
429 aa
AA seq
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MGLLERHESKGRDTWDGLKLPELHCGVEFSGNPRDLKKKGLINAIKAFNPLRIKVGGSLQ
DQVVYGVGGVKNCPNFMKNEDSLFGFSQGYLPMERWDELNKFFNQTGVKVTFGLNALLGR
NRSQIEKGLWVGDWQSQNARDFMKYTISKGYKVDSYEFGNQLSRAGMGASVEAEQYGRDI
LVLKNLVKELHREPKTQPKVLGPSGYYDVKCWELRFCESGGALHGGAKDLSPTFADGFWY
LDQLRMASTYNHKAFCRQTLIGGNYALLNTTTSIPNPDYYSALLWHRLMGSTVLFVTQES
NPNFRVYAHCTKKKPGISIIFINLSKDSSFNVTLSNYEHQSHNLRSTDVTKPNFEFRGSK
DREEYHLAALARNIQGQIVLLNNVLMVPTETFDILTMEPKLVNASTPISIAAHSIVYVTI
RDFQAPACA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggggctgctggaacggcatgagtcgaagggtcgagacacttgggatggcttgaagctt
ccagaacttcattgcggtgttgagttctcaggaaaccctagggatttgaaaaagaagggt
ctgataaatgcaataaaagcattcaatcctttaagaatcaaagttggtgggtcattgcaa
gatcaagtggtgtacggagttggaggagttaagaattgccccaatttcatgaaaaatgaa
gatagtttattcggattctctcagggctaccttcccatggaaagatgggacgaactcaat
aaatttttcaatcaaactggagtaaaggttacgttcgggttgaatgctcttctcggaaga
aatcggtcacaaatcgaaaaaggtctttgggttggcgattggcaatcgcaaaatgcaagg
gatttcatgaagtatactatttccaagggatacaaagttgattcttatgaatttggaaat
caactctccagagctgggatgggtgcaagcgttgaggctgaacaatatggaagagacata
ctagtacttaagaatctagtgaaagaattacaccgagaacccaaaactcaaccaaaggtt
ttaggtcctagtggctattatgatgtgaaatgttgggagcttcggttttgtgaatctggc
ggagctcttcacggcggtgctaaagatttgtccccaacctttgctgacggattttggtat
cttgatcaattgcgaatggcttcaacctacaatcacaaggccttttgcaggcaaactcta
atcggtggaaattatgctttacttaatactacaacatctattcccaatccagattactac
agtgcactcctatggcaccggcttatgggaagtactgtacttttcgtaactcaagagtct
aacccaaattttcgtgtatatgctcactgtacgaagaaaaagcctgggatttctatcatt
tttattaacttgtcgaaagatagctcgttcaacgtcaccctttcaaattacgagcaccag
agtcataatttgagatccacggatgttacgaagcctaattttgaatttagaggttccaag
gatagagaggagtatcatttggctgcgctagctagaaatatacaaggtcaaatcgtgttg
ctaaataacgttctaatggttccaacagaaacattcgacattctgacgatggaaccaaag
cttgtcaatgcttccacgcccatctctattgcagctcattccatagtctatgtaaccatc
agagactttcaagcccctgcctgtgcttaa
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