Gossypium hirsutum (upland cotton): 107889925
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Entry
107889925 CDS
T04793
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107889925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107889925
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107889925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
107889925
NCBI-ProteinID:
XP_040951396
UniProt:
A0ABM3A9U3
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All DBs
Position
D06:complement(29679733..29698885)
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AA seq
322 aa
AA seq
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MKQMMNMPQNLSMNAPFGLPSTSNPTSAGVPATKDRKMASAEHLVLDLSNPDLRESALLE
LSKKRELFQDLAPLLWNSFGTIAALLQEIVCIYPVLSPPNLTPVQSNRVCNALALLQCVA
SHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLST
EIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLRNMVAAIA
EQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSTCLREDQTTRRWLQQLLH
NVGVSRVPTLQAGAGFDHMLVS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaatgatgaatatgcctcaaaatctatcgatgaacgcgccttttgggctgccc
agcacctcgaatccaacttccgccggagtgccggcgactaaggatcggaagatggcatcg
gcggagcatttggttctcgacctgagcaatcctgatctccgagaaagcgctcttctcgaa
ctatcgaagaagagggaactatttcaagatttggctccgttgttgtggaattcttttggt
actattgctgcactgctacaggagatagtttgtatttaccctgttctctcccctccaaat
ctaactcctgttcaatcaaatcgagtttgtaatgcccttgctctacttcagtgtgtagct
tctcacccagacacaaggatgttattcctaaatgctcatatacccctgtatttgtatcct
ttccttaatacaacaagtaaatcgaggccttttgagtacttgaggcttactagcttaggt
gtcatcggtgccttggtgaaggttgatgatacagaagttattagctttcttctttcaaca
gagataatcccactatgcctccgaacaatggagatgggtagtgaactatcgaaaacagtt
gccacttttatagttcagaagattctactagatgatgttgggttggactatatttgcact
actgcagagcgattttttgcagttggtcgagttctgagaaatatggttgctgcaattgct
gagcaaccctcttcacgacttttaaaacatattattcgatgttatcttagattgtcagac
aacccaagagcttgtgatgcattaagaagttgccttcctgatatgttacgcgatgccact
tttagtacttgccttcgtgaggatcaaaccactaggaggtggctgcaacagttgcttcac
aatgttggggtgagtcgggtgccaacacttcaggctggtgcagggtttgatcacatgctg
gttagctga
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