Gossypium hirsutum (upland cotton): 107890053
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Entry
107890053 CDS
T04793
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 4-like isoform X1
KO
K10523
speckle-type POZ protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107890053
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
107890053
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
TRAF-mep_MATH
BACK
MATH
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
107890053
NCBI-ProteinID:
XP_040941828
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Position
A13:complement(110429235..110446587)
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AA seq
410 aa
AA seq
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MTNGATSPVTVATLKVEHSPLLSPTSSQSVTETVNGFHRFVIQGYSLAKGMGIGKHIVSD
NFTVGGYRWAIYFYPDGKNPEDSSTYVSVFIALASEGTDVRALFELTLMDQSGKGKHKVH
SHFDRSLESGPYTLKYRGSMWGYKRFFRRALLETSDYLKDDCLIINCTVGVVVSAIDCSR
LHSIQVPVSDIGAHFGMLLENMEGSDITFDVAGEKFRSHKLVLAARSPVFRTEIFDGVDE
QKKEMVITDLEPRVFKALLHFIYRDTLSEDAESVESSSASLSSVSETLIAKLLAAADRYC
LERLKLMCESRLCKNISVNSVAKILALADEYHATELKAVCLRFAAENLAAVMRSDGFEYL
KDNCPLLQSELLKTIAGCEEDYSSGGKSRSVWAQLSDGTDTNGRRVRQRT
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacggagcaacatcgccggtgacggtggcgacactgaaggttgagcatagccca
ctgctttctccgaccagctcccagtcggtgacggagacggtgaatggtttccaccgtttc
gtgatccaaggttacagcttagccaaagggatgggcattgggaagcacattgtcagcgat
aatttcactgtaggtggctaccggtgggctatttacttttaccccgacggtaaaaacccc
gaagatagttccacttacgtctccgtcttcattgcattggctagcgaaggcaccgatgtt
agggccttgttcgagcttacgcttatggatcagagcggcaaaggcaaacataaggttcat
agccatttcgatcggtcccttgagagtggaccttataccctcaaatatcgcggcagtatg
tggggatacaagcgctttttcagacgagcattacttgaaacatcagattacctcaaggat
gactgcttgataataaattgtacggttggagttgttgtgtcggcgatagattgttcccga
ctacactcaattcaagtgccagtgtctgatataggagcacattttggtatgctgctagaa
aatatggaaggttcagatattacatttgacgtggctggagaaaagtttcgttctcataag
ttggtattggctgctcgatcccctgttttccgaactgaaatttttgatggggtggacgag
caaaagaaagagatggttatcaccgatctagaacctagggtttttaaggccttgttgcac
tttatttacagagacactctttcggaagatgcggagagtgttgagtctagttctgcttct
ttgtcatcagtatccgaaacactaatagctaaattgttagcagcagcagataggtattgt
ctagagagactgaaattaatgtgtgaatctcgtctctgcaagaatatatctgtaaattct
gttgccaaaattctagctttggctgatgaatatcatgctacggaattaaaagctgtttgt
ctcagatttgctgctgaaaaccttgcagctgtcatgcgatcggatggctttgaatactta
aaagacaactgccctttacttcagtcagagctcctcaaaaccatcgcaggttgcgaggaa
gattatagcagtggcggaaaatcacgaagtgtatgggcacaactctcagacggcaccgat
acaaatggcaggagagtcaggcaaagaacatga
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