Gossypium hirsutum (upland cotton): 107890311
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Entry
107890311 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107890311
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Motif
Pfam:
GH3
GH3_M
GH3_C
Motif
Other DBs
NCBI-GeneID:
107890311
NCBI-ProteinID:
XP_040960803
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Position
D11:complement(65083706..65085987)
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AA seq
584 aa
AA seq
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MDGGTDTKEIYENVMNILEDLTSNAHKLQEQVLEEILKSNAGTEYLSRFFPNGQADKQSF
KTNVPIITYEDIKPYIDRIANGDTPSILLAYRITQFIQSSGTSGGQPKLIPMTAESFEKR
MYEPLLPDLVIKRCFNGSDEGKSLYLYFIKPEMETPSGLVASLYTTFYFKTKSFKTGLAK
FCTSPIETILCSDNKQSMFCQLLTGLLQRDEVVRMGSSFASVLPRSIKFLDDYWKELCSN
IRTGYLSDWITDAGCRNAMSLILTRPNPEMADLIQQICEDKSWEGIIKKLWPKIKYITSI
CTGSMSQYIPLLEFYGGGIPLVSPNYSSSEACFGINLKPLSKPFDVSYTFLPNTAYFEFL
PVNKDGGGKAQDTRTIDKPVDLANVKLGQYYEVVVTTLTGLYRYRIGDVLKVTGFYNKSP
QFQFVERQNVVLSIDLDKTTEEDLSKAIMKAKIVLEPLGIMLTTYSSYADTSLMPGRYVL
FWELKMKGRNDLPKLDAEIMEQCCCIVEESFDFTYKSLRKGGIISGLELRVVKHGTFDQL
MDYYVSKGASITQYKPPSCLKSKEAVKILNSGMAGKFFSSKTMF
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgggacagacacaaaggaaatatatgaaaatgtcatgaacattttggaagat
ttaactagcaatgctcataaactacaagaacaagtgttggaggagatactgaagagcaat
gcaggaacagaatatctaagcagattcttccccaatggccaagcggacaagcaaagcttc
aaaacaaatgtccccattattacttacgaagatatcaagccttacatcgatcggattgct
aacggagacaccccatcgatccttttggcttaccgcatcacccagttcatccaaagcagt
ggtacttctggggggcagccgaaattgatacctatgacggctgaaagttttgagaaaagg
atgtatgaacctcttctgcctgaccttgtgataaaaagatgttttaatggctcggacgaa
ggcaaatcattgtacctatattttatcaaaccagagatggaaactccatctggattagtg
gcatcactatacacaacattctatttcaagaccaaaagcttcaaaacgggcctggcgaag
ttttgcacaagtcctattgagaccatcttatgttcggataacaagcaaagtatgttctgc
caattgcttactggtttactacagcgcgatgaggtcgtacggatgggttcaagctttgca
tcagttttgccaaggagcatcaaattcttagatgattattggaaagaattatgttctaac
attagaacaggttatctcagtgattggattaccgatgctggttgcagaaatgctatgtca
ttgatccttacgaggccaaaccctgaaatggctgatttgattcaacaaatatgtgaagat
aaatcatgggaagggatcattaagaaactttggcctaaaatcaaatatattacttctatc
tgtacaggtagcatgagccaatatattccattacttgaattttatggaggagggatccct
ttagtttcaccaaattatagttcttcggaagcttgtttcgggatcaatttaaaaccccta
agcaagccctttgatgtctcttacacctttctcccaaatacggcgtactttgaatttctc
cctgtgaataaagatggtggaggaaaggctcaagacactaggacaattgacaaaccggtc
gatcttgcgaatgtgaagcttggtcaatattacgaagttgttgtcacaactttgacaggt
ctatatcggtacagaatcggagatgttctcaaggtgaccggattctataataaatctcca
cagtttcaatttgttgaacgacaaaatgtggttttgagtattgatttggacaaaacaact
gaagaagacctttcgaaagcaatcatgaaagcaaaaattgtccttgaaccactcggcatc
atgttaaccacatatagtagctatgctgacacttcgttgatgccaggtcgatatgtatta
ttttgggagctgaagatgaaaggcaggaatgatttaccaaaacttgatgccgagataatg
gaacaatgctgctgtatagtggaagaatcctttgattttacatataaatcacttaggaaa
ggtggaataatttcaggtttagagctaagggtggttaaacatggaacctttgatcaactc
atggattactatgtatcaaagggagcttccattacccaatacaagccacctagttgcctt
aaatctaaggaagctgtaaaaattttaaattcagggatggcggggaagtttttcagctcc
aaaactatgttttaa
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