Gossypium hirsutum (upland cotton): 107890436
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Entry
107890436 CDS
T04793
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107890436
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107890436
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
107890436
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
107890436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_GCN1
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
HEAT_EF3_N
TPR_IPO5
TPR_DNAAF5
TPR_CAND1
Vac14_Fab1_bd
HEAT_GCN1_C
HEAT_MROH2B_C
TPR_IMB1
Tti2
RIX1
MMS19_C
UTP20
INTS1_R4
V-ATPase_H_N
Motif
Other DBs
NCBI-GeneID:
107890436
NCBI-ProteinID:
NP_001313699
UniProt:
A0A0E3JP56
LinkDB
All DBs
Position
D09:complement(27627489..27640155)
Genome browser
AA seq
1395 aa
AA seq
DB search
MEKLLELARSKDPKDRATGAELLHSLLQSSTGPLSSSDVESLVSACLHLLNDPSNLNASL
GALQCLASAAVLSADNLKLHFDGVLPAIVECLGDDEQPLRDAARGLLLTFMEVSSPTIIV
DKVGPITWAHNSPRVREEFMRTVTSAITVFTSMEFMKAILPPILQMLNDSIQSIRERASL
CIEEMYMQFGPEFLAELQRNNLPSSVLGDINIRLQKIEPKVFSFNRHMSSASSDQVDSAK
GNQAESNPKTKDSFKDISVSGGEIDFTDKPIVPVTLNSEKELIREMEKIACMLVAENDWS
VRIAAIQRVEAFVIGGATSYPCFHALLKQLVAPLRTQLSDRRSSIVKQACHLLCFLSKEL
LGDFEACSEMFIPVLFKLVVITVLIIAESADTCIKTMLRNCKVSRVLPQIVNHAKHDRNA
VLRARCREYSLLMLEYWADAPEIQKSADLYEDLIKCCIADAMSEVQSNARRCYRLFKKTW
PERSQQLFLSFDSVVQRMINDEDGTAHRRHPSPSVRVRDVRKSHKAFQAPTSTTLPGPAT
SAVTTVDRNRAVPGGIPLSAGPFLSEVKSHRNGTERSFENMLHANKQRAPAIENALAGLN
ISEKLSYQKKRSASFDLGVDPPPACGLSFPPIVAASAVTANAIFTDSTASTVKACLSSKS
GKQACGFMEEYSDDRFARKSVDKHIDKQYVETSSKDANFRDFQGNIIPNFQRPLLRKNIS
TRVSGSSRSFLDDNQILLSEMSNYVDGPASLQEALTEGLSPNSNWSARVAAFNYVRSLLQ
QDQRGVQEVAQNFEKVMKLFFQHLGDPHHKVAHAALSALADIISACRKPFESYLDRILHH
VFSRLIDPKESVRQLSVMNLEVVSKAYGIDSLLPALLRALDEQRSPKAKLAVIEYAISSF
KKNAMNSDGAANSGILKLWIAKLIPLIYDKNTKLKEAAISCIVSVHTHYDSTGVINYIMC
MSAEEQNSLRRILRQQTPRIEMDLMNFLQNKRERPRPRNSHEPSDVGLSPDGEYTGALKK
AYYFGRYSSGSNDIDNSKKLFSMQEPMQVLEPIAQKVSSEAQKNLPQNLEGGSNKAFTCT
TTGADENVESPMSHPDGVDCENSMNNDWPSSCSDMDTMTISNHFGESNSNVGIDTFVDVN
NSHENSSNTKTCCSLKSRIIIPQILHQISNNKESATIRQQALQQLIEASMDTNLSIWTKH
FNQILKVVIEVLDDPDSSTRELTLQLVADMVDKQKDAMEDSIEIVIEKLLHIAKDAVSKV
SIEAEKCLSMILSEYDRFKCLSDIVALLIHEDEKTLIFCIKTLTKPVHRLSQEELLAQLP
SFLPVLFCAFSNQSAEVRKTVVFCLVDIYVMLGKAFRPYLQDLNGTQLRLVTLYANRISQ
ARTGTCVEAINLPAV
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggagaaactccttgaactagcacgttccaaggacccaaaggaccgagcaacaggggct
gagcttcttcattctcttctccagtcttccactggacccttgtcttcttctgacgttgaa
tctcttgtttcagcttgtcttcaccttctcaatgacccatctaacttaaacgcctctttg
ggagctctccagtgtctagcatctgctgccgtgctctcagctgacaacttgaagctgcat
tttgatggggttttacctgcaattgtggagtgcttaggggatgatgagcagcctttacgt
gatgcagctagagggctgttgttgactttcatggaggtttcttctccaactatcattgta
gataaagtagggccgataacctgggcgcataacagcccgagagttcgtgaagagtttatg
aggaccgtcacttctgctatcactgtttttacgtcgatggagttcatgaaggctattctt
cctccgattttacagatgttgaatgactcaattcagagcattagagaacgtgcttcattg
tgcattgaggaaatgtacatgcagtttgggcctgaatttcttgctgaactccagcgaaac
aatcttccttcatcagtgttaggagatattaatatcagattgcagaagatagaaccgaag
gttttcagtttcaataggcacatgtcatctgcttcttctgatcaagttgactcagccaag
gggaaccaagcagagagcaatcctaagacaaaggattcttttaaagatatatctgtttct
ggaggagagattgactttacagacaaacccatagttccagttactttaaactctgaaaag
gagctaataagagaaatggagaagattgcgtgtatgcttgtagcggaaaatgattggtct
gttcgaatagctgctatacagcgagttgaagcttttgtcatcggaggtgccaccagttat
ccatgctttcatgctctcttgaagcaacttgttgcacctcttcgcacacagttgtccgac
cgaaggtctagcattgtaaagcaggcttgtcatctcttatgtttcttgtcaaaagagctg
ttgggggattttgaagcttgttcggaaatgttcatcccagtccttttcaagctggttgtg
attacggttcttataatagctgaatccgcagacacctgcatcaaaacaatgctgcgtaac
tgcaaagtttcccgtgtacttcctcaaatagttaatcatgcaaaacatgaccgtaatgca
gtactccgtgctagatgccgtgagtactctcttctgatgctggagtactgggccgatgcg
ccagaaatacagaaatctgctgatctttacgaggatcttataaaatgctgcatagctgat
gcaatgagtgaggtacagtcaaatgctcgtcgttgctacagactgttcaagaaaacttgg
ccagagcgttctcagcaactatttctgtcctttgattcagtcgtccaaaggatgataaac
gatgaagatgggaccgcgcatagacgccatccttctccttcagttcgagtaagggatgtc
cgtaaatcccataaggcttttcaagcacctacttctacaactttacctggacctgcaact
tcagcagttaccacagtggatcggaatagggctgtaccaggaggcattcctctatctgct
ggtccatttctctctgaagtaaagtcacatcgaaatggtactgaaagaagttttgaaaac
atgctgcatgcaaacaaacagcgggccccggctatcgaaaatgcgcttgctggtttaaat
atatctgagaaactcagttatcaaaagaagcggtcagctagctttgatttaggagttgac
cctcctccagcatgtggcctctcatttccccctattgtcgctgcttcagctgttactgca
aatgctatttttactgactcaactgcgtcaactgttaaagcttgtttgtcatcgaaatca
gggaagcaagcttgtggttttatggaagagtattctgatgataggtttgcccggaaatcg
gtagataagcatattgacaaacagtatgtagagacttcttcaaaagatgccaattttagg
gacttccaaggtaatattattccaaacttccagaggccgcttttaagaaagaacatttca
actcgagtttctggaagcagtagaagctttctagatgacaatcagatactacttagtgaa
atgtcaaactatgtggacggcccagcatcactccaggaggctctgacagagggtctcagt
ccaaattccaattggtccgctagagttgcggcttttaattatgtccgaagtctgctgcag
caggaccaaagaggcgtgcaagaagttgcacagaattttgagaaagtcatgaagttgttt
ttccaacacttgggtgatccacaccataaagttgcacacgccgctctctcggcccttgca
gatataatttcagcatgtagaaaaccttttgaaagttacttggatcgaatcttacaccat
gtgttttcaaggttaattgatccgaaggaatcagttcggcagctttctgtaatgaatctg
gaagttgtaagcaaagcctatggcatagattctcttttaccagctttgctccgtgcatta
gatgaacagagatcaccgaaggcaaaactggctgttatagaatatgctatcagttccttc
aagaagaatgctatgaattcagacggtgctgctaatagcggcattctaaagctgtggatt
gctaaattaatacctttgatctatgataaaaacacaaaactaaaagaagcagccatctcc
tgcattgtatccgtacatactcactatgactccactggtgttataaactacatcatgtgt
atgtcagctgaagagcaaaattctctaaggcgaattcttaggcagcaaactcctcgaatt
gaaatggatcttatgaacttcttgcagaacaagagagaaagaccccgtcctagaaacagt
cacgagccatctgatgtcggactttctcctgatggtgaatatactggtgcattaaagaag
gcctactattttggaagatattcttcgggttcgaatgatatcgataacagcaagaagttg
ttctccatgcaagaaccgatgcaagttttagaacctattgctcaaaaagtatcaagtgaa
gctcagaaaaatttacctcagaatctcgaaggtggctctaataaagcttttacttgcact
actactggtgctgatgaaaatgtggaatccccaatgagccatcctgatggtgttgattgt
gagaattcaatgaacaacgactggccttcgtcatgttctgacatggatacaatgacaatc
tctaaccattttggagaaagcaattccaatgttggtattgacacttttgttgatgtcaat
aatagtcatgagaattccagcaataccaagacttgctgttctctaaaatcgcgtatcatc
attcctcaaattcttcaccagatttctaacaataaggagagtgcaaccattagacagcaa
gcacttcagcagctcatagaagcttccatggatacaaacctttcgatatggacaaagcat
ttcaatcagattctgaaagttgtcattgaggtgttggacgatcctgattcttcaacccgg
gaattgaccttgcagttagtagctgacatggtggacaaacagaaagatgcgatggaagat
tctattgaaattgtaattgaaaagttacttcatattgctaaggatgcagtttccaaggtt
tcaattgaagcagagaaatgcttatcaatgattttatcagaatatgaccgtttcaaatgt
ctaagtgatattgtagcccttttaatccatgaagatgagaaaactcttattttttgcatc
aagacattaacaaagcctgtccatcggctttctcaagaggaacttctggctcagctacct
tcatttttaccggttcttttttgcgcattcagcaatcaaagcgctgaagttcgcaagact
gttgttttctgcttggtcgacatttacgtcatgctcgggaaggcgttccggccatacctg
caggatctcaatgggacccagttgcgtctggtgactctttatgccaacagaatttctcaa
gccagaactggaacttgtgttgaagctattaatttgccagcagtctga
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integrated database retrieval system
