Gossypium hirsutum (upland cotton): 107890457
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Entry
107890457 CDS
T04793
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107890457
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107890457
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
107890457
NCBI-ProteinID:
XP_016670362
UniProt:
A0A1U8HWH8
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Position
D09:3308208..3313896
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AA seq
461 aa
AA seq
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MSTSSQTQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVE
FVDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDTPGNVLLVTIEGVE
ANDVTIETIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLL
PGHVTSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGLMQVPVVGPDGKKQE
PQSNVLLASIENMQYAVTVDVLHSVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTAAVAK
ESLEGHCIYEGGYCKLHLSYSRHTDLNVKAYSDKSRDYTISDLSLLATQGPGMPATPNAW
QNPQNAPSYPGTDYAASAAMQAQPSAGQVPAWDPSLQVRPSYGSVPGTVPGQAYQASAVP
TYMNAAPPAGSSPLSQPGATSMRMPPPGGAPLLGQPPYYGQ
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgtcaagccaaactcagttccgctatacccagacaccatcgaaggtcctgcat
ctccgtaatctcccatgggagtgtacggaagaggaactcgttgagctttgtaaacccttt
gggaagatcgttaacactaagtgcaatgtcggcgccaatcggaaccaagcttttgttgaa
tttgtagacttaaatcaggctatttcgatggtttcatactatgcttcgtcatcggagccg
gcacaggttcgtggaaaaacagtatatattcaatattcaaacagacatgaaattgtcaac
aacaaaagtcctggagataccccaggaaatgttttgctggttaccattgagggtgtggaa
gctaatgatgtgaccattgagacaattcacttggtattttctgcatttggttttgtgcat
aaaattgctacttttgaaaaggctgcgggattccaggcattaatccaattcactgatgct
gaaactgcatcttcagcaaggaatgccttggacggtagaagtattcccaggtacttgctt
ccaggccatgttacttcttgtcacctgcgaatttcgtattctgcacacactgatctgaat
atcaagtttcagtctcatcggagcagggattataccaatccataccttcctgtcaatcca
actgcgatggagggactcatgcaggtacctgtagttggtcctgatggaaaaaagcaagaa
cctcagagtaatgtgctacttgcttcaattgaaaatatgcagtatgctgtgacagttgat
gttcttcactcggtattctctgcatttggcactgtccaaaagattgctatatttgagaag
aatggcggaacacaggcactaattcaatatccggatgtcacgactgcagctgtcgccaaa
gaatccttagagggacactgcatatatgagggtggctattgtaagcttcatctatcatac
tctcgtcatactgatctcaatgtaaaggcttacagtgataaaagtagagattacacaatc
tcagacctaagtttgcttgcgacacaaggtccaggtatgcctgccactccaaatgcttgg
cagaatcctcagaatgctccatcataccctgggactgactatgcagcttcagcggcaatg
caagctcaaccctctgccggacaagttcctgcttgggatccaagtttacaggttagacca
tcatacggatcagtgcctgggactgttcctggtcaagcatatcaagcgtctgcagtccct
acatacatgaatgctgcgccacctgctggttcatcacccctttcccaacctggtgcgact
tccatgagaatgccacctccaggtggtgcaccactgctaggtcagcctccctattatggt
caatga
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