Gossypium hirsutum (upland cotton): 107890459
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Entry
107890459 CDS
T04793
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107890459
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
107890459
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
107890459
NCBI-ProteinID:
XP_016670367
UniProt:
A0A1U8HWI2
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Position
D09:complement(3236160..3241028)
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AA seq
538 aa
AA seq
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MAGQRNSYGKRSHSHSGYSENGSNKRRNAGDDREQFVIDSDDTVYRYLCPARKIGSIIGR
GGEIVKQLRAETKSKIRIGETVPGSDERVVTIYSSRDERNALEDGDTFVSPAQDALFRVH
DKVVAEDLHSDDESEGHQITARLLVSSDQIGCVIGKGGQIVQNIRSETGAQIRILKDNLP
SCALSTDELVQISGEAAVVKKALHQIASRLHENPSRSQHLLASAVSNAYPAAGAMLGPAA
GAQIVGITSLVGPYGRYKGDTGEWPRSMYSAPRDEMSSKEFSLRLVCPTANIGGVIGKGG
AIINQIRQESGAAIKVDSSTTDGDDCLITISAKEFFEDTYSPAIEAAARLQPRCSEKVER
DSGIVSFTTRLLVPTSHIGCLIGKGGAIVTEMRRITKANIRILSKENLPKIASEDDEMVQ
IAGDLDVAKDALVQITTRLRANLFDREGAVNALVPVLPYLHVPTEGTDSLSYESREGKRH
GRVHSFSGGYGSSDLAASDDYGSYGGLQIGSTTGAYGAYSSGRGGPSGLSSHTSVSRR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcagaggaatagctatgggaagcggtctcattctcactctggctattctgag
aatggatcaaataagaggagaaatgcaggtgatgacagggaacaatttgttattgattca
gacgataccgtatataggtatttgtgccctgcaagaaagataggaagcattattggaagg
ggaggggagattgttaagcaattaagagcagaaactaaatcaaagattagaattggtgaa
acagttcctggttctgatgagcgcgtggttactatctatagctctagagatgagagaaat
gcccttgaagatggggatacttttgtttctcctgctcaagatgctttattcagggtgcat
gacaaagttgttgcagaagacttgcacagtgatgacgaatctgaaggccaccaaattact
gctcggcttcttgtatcttctgatcagattggatgtgttataggaaagggtggacagatc
gttcagaacatacgtagtgaaactggtgctcagattcgcattcttaaggacaatttacct
tcttgtgccttgtccacagatgaacttgtacagatatctggggaagctgcagttgtgaag
aaggctctgcatcaaattgcatctcgccttcatgagaacccttcacgatctcagcacttg
ctcgcttctgctgtgtcaaatgcatatcctgctgctggtgcaatgcttggtccagctgct
ggtgcccagattgtagggataacttcattggttggaccttatggacgatacaaaggtgac
actggagaatggccacgctctatgtactcggctccaagggatgagatgtcatcaaaagaa
ttttctcttcgtttggtttgtccaactgctaatattggaggagtgattggcaaaggtggt
gctataatcaaccagatcaggcaggaatcaggtgcagccatcaaagtagatagctcaact
acagatggagatgattgcttaataactatatcagctaaggagttctttgaggatacgtat
tcacctgctatcgaagctgctgcacggttgcaacctagatgcagtgagaaggttgaaaga
gactctggaattgtatcattcacaacccgcttacttgtgccaacctcacatattggttgc
cttattggtaaaggaggagctattgtaacggagatgagaaggatcacgaaagctaatatc
cgtatcctgtcaaaggagaatcttccaaaaattgcatctgaagatgatgagatggttcag
attgctggagaccttgatgttgcaaaggatgcccttgtacaaataacaacacggttaaga
gcaaatctttttgatagggaaggtgctgttaatgcgttagtgccagttttaccgtatctt
catgtgccaactgaaggaacagacagtttgagttatgaaagtagagagggcaagaggcat
ggacgtgtgcactccttttctggtggttatggctctagtgatttagctgctagtgatgac
tatggaagttatggtggtctccagattggtagtaccaccggtgcttatggagcttattct
tcaggacgtggtggtccttctgggttatcaagccatacctctgtttcccggcgctaa
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