KEGG   Gossypium hirsutum (upland cotton): 107890675
Entry
107890675         CDS       T04793                                 
Name
(RefSeq) protein FIZZY-RELATED 2
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107890675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107890675
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     107890675
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_Aladin WDR55 Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st eIF2A WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_RIG_1st NBCH_WD40 Aldo_ket_red Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_SCAP Peptidase_M10_C Beta-prop_SPT8 MIOS_WD40 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 107890675
NCBI-ProteinID: XP_016670687
UniProt: A0A1U8HXE0
LinkDB
Position
D09:complement(49488874..49493357)
AA seq 483 aa
MDDPTLSNQRNQSVPSTPSLNVPTTMSDSSFHLENLPYRTMHINRMINSSYNRSPSRTIY
SDRFIPSRSGSNFALFDISNSPTSTEGKEDGSGTYNSLLRAALFGPDTPDKKDSLDAPAC
RNIFRYKTETKRSLHSLSPFGLDDSVPGISHSPVKTPRKVPRSPYKVLDAPALQDDFYLN
LVDWSSNNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVSWAQRGTHLAVGTSDGE
VEIWDASRCQRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAPDDFASKLSGHK
SEVCGLKWSYDNRELASGGNDNKLFVWNQHSTQPVLKYCEHNAAVKAIAWSPHLHGLLAS
GGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM
SKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTDSEIGASSFGRT
TIR
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggacgatcctacgctaagcaatcaacgcaatcaatctgttccttcaactccaagtctc
aacgtcccgaccacaatgtccgactcttccttccacctcgaaaaccttccgtatcggaca
atgcacatcaaccggatgatcaactccagctacaaccgctctccatcgcgcacaatttac
tccgataggttcatacctagcagatccggctccaatttcgcccttttcgacatctccaat
tctcccacttcaaccgaaggaaaagaagacggttccggtacttataacagccttttacgc
gccgctcttttcggtcccgatacgcccgacaagaaggactcgttggacgctccggcttgc
cggaatattttccggtataaaactgaaactaaacggtcgttacactcgctttctcctttt
gggctcgatgactcggtcccggggattagccatagccccgttaaaactcctaggaaagtt
cccaggtcaccttacaaggttttggatgcacctgctttgcaagatgatttttatttgaat
ttggtggattggtcttcgaacaatgtgttggcggtggggttggggaattgtgtttatttg
tggaatgcttgtagtagtaaggtgacaaagttgtgcgatttggggattgatgatagtgtt
tgttcggttagttgggctcaacgtggaactcatctcgcagttgggactagcgacggggaa
gttgagatttgggatgcttctcgctgccagagggtaagaacaatggaggggcatcgatta
cgcgttggggctttagcttggagctcttctctgttatcttctggtagtcgtgacaagagc
attcttcaaagagatatacgtgctccagatgattttgctagtaaactctctggtcacaag
tccgaggtttgtggactgaagtggtcttatgataaccgtgaactagcatcaggcggaaat
gacaacaaactttttgtttggaatcaacattccactcaacctgtcctgaaatactgtgaa
cataatgctgctgtaaaagcaatcgcatggtcccctcatttgcatggccttcttgcatct
ggaggtggtacagctgatcgatgtattcgattctggaatacaaccactaacacacactta
agctgcatggacactggcagtcaggtatgcaatcttgtgtggtctaagaatgtcaatgaa
ctcgtcagcactcatggatactctcaaaaccaaataatcgtctggagataccccaccatg
tcgaagctggctactcttacgggtcacacatacagagttctttatcttgcaatctcacct
gatggacagacgatagttactggtgctggagatgaaacactaagattttggaatgttttc
ccgtccccaaaatcccagaacacagatagtgaaatcggagcatcatcatttggaagaacc
acaattcgttga

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