Gossypium hirsutum (upland cotton): 107890675
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Entry
107890675 CDS
T04793
Name
(RefSeq) protein FIZZY-RELATED 2
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107890675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107890675
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
107890675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_Aladin
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
eIF2A
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_RIG_1st
NBCH_WD40
Aldo_ket_red
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_SCAP
Peptidase_M10_C
Beta-prop_SPT8
MIOS_WD40
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
107890675
NCBI-ProteinID:
XP_016670687
UniProt:
A0A1U8HXE0
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All DBs
Position
D09:complement(49488874..49493357)
Genome browser
AA seq
483 aa
AA seq
DB search
MDDPTLSNQRNQSVPSTPSLNVPTTMSDSSFHLENLPYRTMHINRMINSSYNRSPSRTIY
SDRFIPSRSGSNFALFDISNSPTSTEGKEDGSGTYNSLLRAALFGPDTPDKKDSLDAPAC
RNIFRYKTETKRSLHSLSPFGLDDSVPGISHSPVKTPRKVPRSPYKVLDAPALQDDFYLN
LVDWSSNNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVSWAQRGTHLAVGTSDGE
VEIWDASRCQRVRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRAPDDFASKLSGHK
SEVCGLKWSYDNRELASGGNDNKLFVWNQHSTQPVLKYCEHNAAVKAIAWSPHLHGLLAS
GGGTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTM
SKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTDSEIGASSFGRT
TIR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcctacgctaagcaatcaacgcaatcaatctgttccttcaactccaagtctc
aacgtcccgaccacaatgtccgactcttccttccacctcgaaaaccttccgtatcggaca
atgcacatcaaccggatgatcaactccagctacaaccgctctccatcgcgcacaatttac
tccgataggttcatacctagcagatccggctccaatttcgcccttttcgacatctccaat
tctcccacttcaaccgaaggaaaagaagacggttccggtacttataacagccttttacgc
gccgctcttttcggtcccgatacgcccgacaagaaggactcgttggacgctccggcttgc
cggaatattttccggtataaaactgaaactaaacggtcgttacactcgctttctcctttt
gggctcgatgactcggtcccggggattagccatagccccgttaaaactcctaggaaagtt
cccaggtcaccttacaaggttttggatgcacctgctttgcaagatgatttttatttgaat
ttggtggattggtcttcgaacaatgtgttggcggtggggttggggaattgtgtttatttg
tggaatgcttgtagtagtaaggtgacaaagttgtgcgatttggggattgatgatagtgtt
tgttcggttagttgggctcaacgtggaactcatctcgcagttgggactagcgacggggaa
gttgagatttgggatgcttctcgctgccagagggtaagaacaatggaggggcatcgatta
cgcgttggggctttagcttggagctcttctctgttatcttctggtagtcgtgacaagagc
attcttcaaagagatatacgtgctccagatgattttgctagtaaactctctggtcacaag
tccgaggtttgtggactgaagtggtcttatgataaccgtgaactagcatcaggcggaaat
gacaacaaactttttgtttggaatcaacattccactcaacctgtcctgaaatactgtgaa
cataatgctgctgtaaaagcaatcgcatggtcccctcatttgcatggccttcttgcatct
ggaggtggtacagctgatcgatgtattcgattctggaatacaaccactaacacacactta
agctgcatggacactggcagtcaggtatgcaatcttgtgtggtctaagaatgtcaatgaa
ctcgtcagcactcatggatactctcaaaaccaaataatcgtctggagataccccaccatg
tcgaagctggctactcttacgggtcacacatacagagttctttatcttgcaatctcacct
gatggacagacgatagttactggtgctggagatgaaacactaagattttggaatgttttc
ccgtccccaaaatcccagaacacagatagtgaaatcggagcatcatcatttggaagaacc
acaattcgttga
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