Gossypium hirsutum (upland cotton): 107890770
Help
Entry
107890770 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107890770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107890770
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107890770
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
107890770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
107890770
NCBI-ProteinID:
XP_016670791
UniProt:
A0A1U8HXQ6
LinkDB
All DBs
Position
D09:complement(48657453..48660210)
Genome browser
AA seq
344 aa
AA seq
DB search
MEYDNIECVSSIDGLNEDEIHHHNLHHPNPHHGHHPFSSSKPHNATNNANNSNMANNSNM
ANNIVGATGITPATSVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKARVHNQCPTCRSE
LGDIRCLALEKVAESLELPCKYYNLGCPEIFPYYSKLKHEAACNFRPYNCPYAGSECSVV
GDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHSFGQYFCLHFEAF
QLGMAPVYMAFLRFMGDEAEARNYSYSLEVGANGRKLTWEGTPRSIRDSHRKVRDSHDGL
IIQRNMALFFSGGDRKELKLRVTGRVWKEQQNPDAGPCIQNLCS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgataatatagaatgtgtgtcatccatagatggattgaatgaggatgagatc
catcaccataatctgcatcatccgaatcctcatcatggtcaccatccattctcatcttca
aagcctcacaatgccaccaacaacgccaacaatagtaatatggccaacaatagtaatatg
gccaacaatattgtgggtgctaccgggatcactcccgctaccagcgttcatgaattgtta
gaatgccctgtttgtaccaattctatgtacccaccaatccatcagtgccaaaatggacat
acactttgttctacctgtaaagcaagagtacacaaccagtgccccacatgtagatcagaa
ctgggtgatattagatgtttagcgttggagaaggtggctgagtcccttgaattgccatgc
aaatactacaatttgggatgccctgaaatctttccctattacagtaaactcaaacatgag
gcagcttgcaattttagaccatacaattgcccgtatgccggatcagagtgttcagttgtt
ggggatattcccttcctggttgcccatctgagagatgatcacaaagtggacatgcacact
ggatgcacatttaaccatcgttatgtgaagtccaacccccgagaagtcgaaaatgctact
tggatgctaacagtcttccattcttttggtcagtatttctgccttcactttgaagcattc
cagcttggcatggccccagtctacatggcatttcttcgtttcatgggcgatgaggccgag
gctaggaactatagctacagccttgaggttggagcaaatggccgaaaacttacatgggaa
ggtaccccacgtagcatccgtgatagtcaccggaaagtcagggacagccatgatggtctg
attatccagcgaaacatggcacttttcttctctggcggggaccggaaggagctaaagctg
agggtcaccggaagggtatggaaggaacaacaaaatcccgacgctggaccgtgcattcaa
aatttgtgtagttga
DBGET
integrated database retrieval system
