Gossypium hirsutum (upland cotton): 107890886
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Entry
107890886 CDS
T04793
Name
(RefSeq) protein argonaute 1-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107890886
03036 Chromosome and associated proteins [BR:
ghi03036
]
107890886
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107890886
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107890886
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107890886
microRNA pathway
RISC loading complex
107890886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
Gly-rich_Ago1
ArgoMid
Motif
Other DBs
NCBI-GeneID:
107890886
NCBI-ProteinID:
XP_016670962
UniProt:
A0A1U8HY72
LinkDB
All DBs
Position
D09:47305871..47316041
Genome browser
AA seq
1050 aa
AA seq
DB search
MVRKKRTDVPSAGGESSQSHDTGVGSGRATQRPPQQGGAGGGGYSTGRGLVPQSQQTGRG
GYSAGGRGRGTSQQQFAERPPEYQGRGRGGPPQQGGRGSYGSGRGSGGGPFHGGPSRPPY
PELHQATQPFHGPASFEAGSSSRPPEHAPSAQSLHIPEEAGQAIQPVPSSSKSVRFPLRP
GKGCTGTKCIVKANHFFAELPDKDLHQYDVTITPEVASRGVNRAVMEQLVKLYRESYLGK
HLPAYDGRKSLYTAGPLPFVSKEFTITLIDDDDGSGMQRRECEFRVVIKLAARADLHHLG
LFLQGKQADAPQEALQVLDIVLRELPTSRYCPVGRSFYSPYLGRRQSLGEGIESWRGFYQ
SIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQLLNRDVSSRPLSDADRVKIKKALRGVKV
EVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFYETYGFVIQHTQWPCLQV
GNQQRANYLPMEVCKIVEGQRYSKRLNERQITALLRVTCQRPQEREYDIIETVHQNAYHE
DPHAKEFGIKISEKLASVEARILPAPWLKYHDTGREKNCLPQVGQWNMMNKKMVNGGTVN
NWICINFSRQVQDSVALRFCYELSQMCYISGMAFTPEPVLPPISARPEQVEKVLKTRYHD
AMTKLQTQRKELDLLIVILPDNNGSLYGDLKRICETDLGIVSQCCLTKHVFKMSKQYLAN
VALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQD
WPEITKYAGLVCAQAHRQELIQDLFKTWQDPVRGTVSGGMIKELLISFRRATGHKPQRII
FYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDRNA
VDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADALQSLT
NNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMISGPAAGRGGMGGSAG
PRSTRAPAAATAVRPLPALKENVKRVMFYC
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggttaggaagaagagaactgatgttccttctgctggaggtgagagctcccagtcccat
gacactggtgttggcagtggtcgtgctacccaacgccctcctcagcaaggaggagctgga
gggggaggttactcaactggaagaggtctggttccacagtcccagcaaactggtcgggga
ggttacagtgctggtggtcggggtcgcggtacgtcacaacagcagtttgctgaaagaccc
cctgaataccaaggtagaggaaggggtgggcctccccagcaaggaggtcgtgggagctat
ggaagtggtcgaggcagtggaggagggcctttccatggtggaccatcccgaccaccttat
cccgagctgcaccaagcaacccaaccttttcatgggcctgcatcatttgaggcaggttct
tcatccagaccccctgagcatgcaccatcggcacagtcgcttcacatcccggaagaagct
ggccaagcaattcagccagtcccttcatcaagcaagtctgtgaggtttcctcttcggcct
ggaaagggttgcactggcacaaagtgtatagtcaaggctaatcatttctttgctgaattg
ccagataaagatttgcaccagtatgatgttactataacaccggaggttgcatcacgtgga
gtgaaccgagctgtaatggagcagctggtaaaattatacagagaatcatatcttggaaag
caccttcctgcttatgatggtcgaaagagcctttacaccgctgggcctctcccttttgtg
tcaaaggagtttacgatcacccttattgatgatgatgatgggtcgggaatgcaaagaaga
gagtgcgaatttagagttgtgatcaaactggctgcacgtgctgatctgcatcatcttgga
ctctttctgcaagggaagcaagctgatgcacctcaggaagctcttcaggttcttgacatt
gttcttcgtgaattacctacttctaggtactgtcctgttggccgttcattttactcccct
tacctagggagaaggcaatctttgggtgagggaatagaaagttggcgtggtttctaccaa
agcattcgtcccacacagatggggctctcacttaatattgatatgtcttcaactgctttc
attgagccattgccagttattgattttgtggcacaattgctgaatcgggatgtttcttct
agaccactatctgatgctgatcgtgtgaagatcaaaaaggctcttagaggagtcaaggtg
gaagttacgcaccgaggaaacatgcgaagaaaatatcgcatatctggtttaacatcacaa
gcaactagagagctgacttttcctgtagatgaaagaggtacaatgaaatctgttgtggag
tacttttatgaaacttatggtttcgtaatccaacacacccaatggccttgtctacaagtc
ggaaaccagcagagagcaaattatttgccaatggaggtatgcaagattgttgagggtcag
aggtactccaagaggttgaatgagagacagatcactgctctgctgagggtcacctgccag
cgtcctcaggaaagggagtatgatatcattgagacagtacatcagaatgcttaccatgag
gaccctcatgccaaggaatttggaattaaaattagcgagaagcttgcttcagttgaagca
cgcattctacctgcaccatggcttaaatatcatgatacgggtagagagaagaactgcctt
cctcaagttgggcaatggaatatgatgaataagaaaatggttaatggtgggactgtaaac
aactggatctgcataaatttttctcggcaagtccaagatagtgtggcactaaggttttgt
tatgaactttcacaaatgtgttatatctctggcatggcttttactcctgaaccagtgctt
cctccaattagtgctcgtccagagcaagtggagaaggtcttgaaaacaagatatcatgat
gccatgactaaactccaaacccagcgcaaagagcttgacctgctaattgttattcttcca
gacaataatggctctctttatggtgatttgaaaaggatttgtgagacagatcttggaatt
gtttctcagtgctgcttgactaaacatgtatttaaaatgagcaaacagtatttggctaat
gtggcattgaagattaatgtcaaggttggaggaaggaatacagttcttgttgatgcgata
tcacgacgaatacctctagtcagtgaccgaccgactataatttttggtgctgatgttacc
catccgcaccctggggaggattcaagcccttctattgcagctgttgttgcctcccaagat
tggcccgagattacgaagtatgctggtttggtttgtgctcaagctcatcgccaggagctc
atccaagatttattcaagacatggcaggatccagtaagggggactgtttctggtggcatg
attaaggagctcctaatatctttccgaagagcaactggacataagccacagcgcatcata
ttctacagggatggtgtcagtgaaggccagttttatcaagtgttgttgtatgaactagat
gctattcgtaaggcatgtgcttctttggagccaaattatcagcctcctgttacctttgtt
gtagtacaaaagcgacaccacacaaggttgtttgctaacaaccataatgatcgcaatgct
gttgacaagagtgggaatattttgcctggcacagtggtggactccaaaatctgtcatccc
acggagtttgacttctacttatgtagccatgctgggattcagggtacaagccgtccagct
cattatcatgtgctatgggatgagaacaagtttacagctgatgctttgcagtctcttaca
aataacctttgctatacatatgcaaggtgcacgcgatctgtgtctatcgttccccctgca
tactatgctcatcttgctgcattccgagctcgtttttacatggaaccagagacttcagac
agtggatcaatgataagtggccctgcagcagggcgaggaggtatgggtggaagtgctggt
ccacgaagcacaagagcacctgctgctgctactgctgtgagacctctgcctgcccttaag
gaaaatgtcaagcgggttatgttttattgttag
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integrated database retrieval system
