Gossypium hirsutum (upland cotton): 107890962
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Entry
107890962 CDS
T04793
Name
(RefSeq) LIMR family protein At5g01460
KO
K14617
LMBR1 domain-containing protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
107890962
04980 Cobalamin transport and metabolism
107890962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107890962
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
107890962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
AcrZ
DUF6074
Motif
Other DBs
NCBI-GeneID:
107890962
NCBI-ProteinID:
XP_016671058
UniProt:
A0A1U8I4B0
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Position
D09:complement(46619014..46623493)
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AA seq
510 aa
AA seq
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MGDFNLALVIVAIVVCVLVFLFNVYLLVNYQHPDDANQAYFPKFVVVFGLSIAAISILML
PADVANRQACRHAIYNGACNLTLPMKELWLAVYIIDAVLVFFVIPFAMFYYEGDQDKSVG
KRIKSALLWVVTTAIVCALLLGILYGLAGKVDFTVRHLSSVTTNFPSNWDFSSGQPCIGG
SGAHACSAYTASASSEKTWTMRTTFPEYVVALATIVGSVLFSIFGGVGIACLPLGLIASF
IRRPKAVITRSQYIKEATELGKRAKEVKKAADALHQEERSGSKGRKWRKNVKAVEKELLQ
LEEDVKLLEEMYPQGEKAETSWALTVLGYLAKLVLGILGLIVSVAWIIHIVIYLLIDPPL
SPFLNEVFIKLDDIWGLLGTVAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLM
NSFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIA
FIVLAALTFVYYVAFGWRRKKPSGRFQLSS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttcaacctggctctggtaatcgtcgccatagttgtgtgtgtcctagtgttt
ttgttcaatgtctacctccttgtcaattaccagcatccggacgacgctaaccaagcgtat
ttccccaaattcgtcgtcgttttcgggctctccatcgctgccatttccatactcatgtta
ccggctgatgttgccaaccggcaggcgtgtaggcacgcgatatacaacggcgcctgtaat
ctcaccttgcctatgaaagagctttggctcgccgtttatatcatcgatgctgtgctcgtt
ttttttgtaatccccttcgctatgttctactacgaaggagaccaggacaagagtgttggg
aaacggataaagagcgcgttgctatgggtggtgacaacggcaattgtttgtgctctcttg
cttggaattctctatgggttagctggaaaggtggattttactgttaggcacttgtcttct
gtcactactaatttcccaagtaattgggacttctctagtggtcagccttgtattggtggc
agtggtgcacacgcgtgttctgcatatactgcaagtgcttcatcagagaaaacatggact
atgcgtactacctttccagaatatgttgttgcccttgccacaattgttggatcagttctt
ttctcgatatttggtggtgtaggtattgcttgtttgcctcttgggcttattgcttcattt
atacgccgtccaaaggctgttatcactcgctcacaatatattaaggaagcaactgaactt
ggtaaaagggcaaaagaagtgaagaaagctgctgatgcccttcatcaggaagaaagaagt
ggctctaagggtagaaaatggcgtaaaaatgttaaggctgtggaaaaggagttgcttcag
ctagaagaagatgtaaaacttttggaagagatgtatcctcaaggagaaaaggctgaaact
tcctgggccttgactgttcttggatacttggcaaaacttgtgttgggaatcttagggttg
attgtttcagtggcttggatcattcatattgtcatataccttctgattgatccaccgctt
tctcccttcctgaatgaggttttcatcaagctggatgatatatggggtcttctgggtact
gttgcatttgcattcttttgcttctaccttctgcttgctgtgattgctggagcaatgatg
cttggcctgcgattggttttcattacaattcatcctatgaagtggggagctacgctaatg
aactcttttctgttcaatgtggggcttattcttttgtgctcaataagtgtcatacagttc
tgtgccaccgcatttgggtactatgctcaagcaactgctgcccaggaaatattcggccac
acattgcagtctcttcgtggaattaaatatttgtacaagtataatgtatttcaaatcgca
ttcattgttttagcggcattgaccttcgtgtattatgttgcctttggatggagaagaaaa
aaacctagcggcaggttccagctttcctcgtaa
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