Gossypium hirsutum (upland cotton): 107891087
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Entry
107891087 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107891087 isoform X1
KO
K17925
sorting nexin-13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107891087
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
107891087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
107891087
NCBI-ProteinID:
XP_016671225
UniProt:
A0A1U8HYY9
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Position
A04:85947023..85954488
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AA seq
1045 aa
AA seq
DB search
MKPMETIQDLIDEAKVRTVWWVIAIFAVTYFLSHTSTSMWMNLPVAVLILSALRILTNEV
EFKWKIKSVRPQTYLSHLEKKQLSVNDYRLSSTPPSPKWKRKIDSPMVESAINEFIDKIL
KDFVTDLWYSEITPDRETPELMRAVILDAIGEISGRVKGINLVDLLTRDIVDLIGDHLDL
FRRNQAAIGVDVMVTLSSEERDERLKHHLLVSEELHPALISPESEYKVIQKLVGGILAIV
LRPREAQCPLVRTIAREIVTCLVLQPLLKLASPGYINEVIEHVLLAIKDDTNKMVVGSDQ
PSVGVHGDDSTSYKKSSTNSQGADLTLARIDDRKETYSDCNRYEEESVQPRPADWARILE
AATQRRTQVLAPENLENMWTKGRNYKKKSKHEKAGFQESITKDSVTKSAVLTGNSGSEIS
TSKFGTSTGREEKNVMQLMPVLSNDTQLCDDNTTSKKLGSEFNKSSSFEGDHIVEKHTDA
SKQAADGNKNRLRRSSSTSDLKVKPDIKKALTGDIGRPITSEFYSHDVGRHSEEYSGKIA
SNMVLHNEEPHTPKLRCRVIGAYFEKLKSKPFAVYSIAVTDAENRTWFVKRRYSNFERLH
RHLKEIPNYTLHLPPKTIFSSSTEDALVHQRCIQLDKYLQDLLSKANVAEQHEVWDFLSV
SSKNYSFGKSSSVMRTLAVNVDDAVDDIVRQFRGVSDGLMRKVVGSSSLPIEASSSADRT
LSWNADEMAKDISRQSNLETVNSASDNDERYKDGSHGQDDRSGPQGHGSHSEDELNSKSL
PPKVIEQGGEPDNFVPEKQDLGVKPEFLGQGGFPEVKFSSTSSPWEDPVGMPPEWTPPNV
SVPLLNLVDKVFQLKRRGWLRRQVFWISKQILQLVMEDAIDDWLLRQIYWLRREDTVALG
IRWVQDVLWPGGTFFTKLANIQSKLGDTQQPNQQLSGTSSQFSGSNVSKPRSFEQQLEAT
RRASDIKKMLFDGAPTTLVSLIGHKQYRRCARDIYYFTQSTICVKQLAFAILELLLISIF
PEMRELVKDLHGKKQIKVTQDFRFG
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatggagacgatacaggatctgatcgacgaagccaaagtacggacagtttgg
tgggtcatagcaatctttgccgtcacttacttcttgtctcatacaagtacatcaatgtgg
atgaatttacctgtagcagttcttatactgtctgcattgcgaattttaactaatgaggtt
gagttcaaatggaaaattaaatcagttcgtccgcaaacttatttatctcatttggagaag
aaacagttgtctgtgaatgattaccggctttctagcacaccaccttcgcccaagtggaag
aggaaaattgattctcctatggtggagtcagctatcaatgagtttattgataaaatactc
aaggattttgtaactgatttatggtattcggagatcactccagatagggagacccctgag
ttgatgcgtgcggtgattttggatgctattggtgaaatatcaggaagggtgaaagggata
aaccttgttgatttgctaacaagggatatagttgatttgataggggaccacttggatctc
tttagaagaaaccaagctgcaataggtgttgatgttatggtaacattgtcatctgaggag
agggatgaaagactgaaacaccatcttctggtttctgaagagcttcatcctgcattgatt
tcaccagagagtgagtacaaggttattcagaagcttgtcggtggaattttagcaatagta
ttgagaccgcgagaagctcaatgtcctctagttcgaactattgcccgtgagattgtaact
tgcttggtattgcaacctcttttgaaattggcaagccctgggtatatcaatgaagtgatt
gaacatgttctacttgccattaaagatgatacaaataagatggtggttggttctgatcag
ccttcagtaggagtacatggtgatgattctacctcatataaaaaatcgtcaacaaacagt
caaggggctgatttgactttagctagaattgatgataggaaagaaacatattcagattgt
aacagatatgaggaagaatcagtacagcctcgaccagctgattgggctcgaatattagag
gcagcaactcaaagaagaactcaagttcttgcccctgaaaatcttgaaaacatgtggaca
aaaggaagaaactacaaaaagaagagcaaacatgaaaaagcaggatttcaagaatctatt
acaaaggattctgtgacaaagagtgcagtattaacagggaattcaggcagtgaaatctct
accagcaagtttggaacttcaactggaagggaagagaaaaatgtgatgcagctgatgcct
gttttaagtaatgacactcagttatgtgatgataacactaccagcaagaagttgggatcg
gagtttaacaagtcatcatcatttgaaggagatcatattgtcgaaaaacatactgatgct
agcaagcaagctgctgatggaaataagaataggcttaggagatccagcagtacctctgac
ttgaaagttaaacctgatataaagaaggcacttacaggagatattggaaggccaattact
tctgagttctacagccatgatgttggcaggcatagtgaagaatatagtggcaagattgcc
tctaatatggtgcttcacaatgaggaaccgcacactccaaagcttagatgtcgggttatt
ggagcatactttgagaaacttaaatcaaaaccattcgcagtttattcaattgctgtgaca
gatgcggaaaacagaacttggtttgtcaagagaagatacagtaactttgaacggttgcat
agacatcttaaagaaattcctaattatacattgcatttacctcccaaaacaatattttca
tcaagcactgaggacgctttagttcatcagcgctgcattcagcttgacaaatatctgcaa
gatctgttgtctaaagccaatgtggctgaacagcatgaagtgtgggattttttaagtgtt
tcctcaaagaattactctttcggaaaatcttcttcggtgatgagaacccttgctgtcaat
gtagatgatgctgtggacgacattgtacgccagtttagaggagtatcagatggcttaatg
cgcaaagttgtcggttcatcttctcttcctattgaagcctcttcttcagctgacaggacc
ttgtcatggaatgcagatgagatggctaaagacatttctaggcaaagtaacttagaaaca
gtgaatagtgcttctgacaatgacgaacggtacaaggatggtagccatggtcaggatgat
agatctggtccacaaggtcatggctcgcattcagaggatgaattgaactcaaagagtttg
ccaccaaaggtgatagaacaaggtggagagcctgacaattttgttcctgagaaacaggat
ttaggtgtgaaacctgaattccttggccagggtggatttcctgaagtaaaattttcatca
acatctagcccttgggaggatccagttggaatgccccccgagtggacaccacctaatgtt
agtgtacctttgctgaatctagttgataaggtgtttcagctgaagagaagaggctggcta
agaagacaggtcttttggatatctaagcaaatattacagctggtgatggaggatgccatt
gatgactggcttttgaggcagatttattggcttcggagggaagacactgttgccctaggc
attcgatgggttcaagatgttctatggccaggtggtacgttctttacaaaattggcgaac
attcagagcaaacttggtgatactcaacagccgaaccagcaactttcagggacctccagc
cagtttagtgggagtaatgtctctaaacctcggtcctttgagcaacaacttgaggctact
cgtagagctagtgacatcaaaaaaatgctttttgatggagctccgacgaccttagttagc
ttgatcgggcataaacaatatcgacgatgtgcaagagacatttattatttcactcagtcc
acaatatgtgtgaagcaacttgcttttgcgatattagaacttctactcatatctattttc
cccgagatgcgggaacttgtgaaggatcttcatggcaagaaacaaattaaagtcacgcag
gatttccgttttggatga
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