KEGG   Gossypium hirsutum (upland cotton): 107891123
Entry
107891123         CDS       T04793                                 
Name
(RefSeq) zinc finger protein JACKDAW
  KO
K25870  zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ghi03000]
    107891123
Transcription factors [BR:ghi03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    107891123
SSDB
Motif
Pfam: C2CH-4th_BIRD-IDD C2H2-2nd_BIRD-IDD C2CH-3rd_BIRD-IDD zf-C2H2 zf-C2H2_STOP2_C zf-C2H2_jaz zf-met zf-C2H2_4 zf-C2H2_6
Other DBs
NCBI-GeneID: 107891123
NCBI-ProteinID: XP_016671288
UniProt: A0A1U8I4Z3
LinkDB
Position
D09:complement(45260506..45263805)
AA seq 452 aa
MSGEAFSLPAASIGGFIQDPSNANPNPKPNANPAKKKRNLPGTPDPDAEVIALSPKTLMA
TNRFICEICKKGFQRDQNLQLHRRGHNLPWKLRQRTNKEVRKKVYICPEKTCVHHDPSRA
LGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDS
FITHRAFCDALAEESARLTSVAATSLNFRNDTVNLPHGFAGRGVQDVAGIPQFGSGFAQD
FSGMPAPGLPEMVRMAPANLFGSSSHFPGFENGGATSSNSNNLSLSQLPQGLKEEGRNEG
NLMESLSSLYSDNQNKQSKANASPMSATALLQKAAQMGSTRSNPSFFGNSFGVMSSSSSH
TAPTFMASSSASMSATSNKLDKLMLQTGGKPSEPSLLSMHHPGSNSFAQSLTRDFLGMSN
DQSPRPFLPQELAKYAAIGSTMGLSQFTSSNH
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtccggtgaggcgttttctttaccagctgcttcaataggagggtttattcaagaccca
agtaatgcaaaccctaaccctaaacctaatgctaatcctgctaagaagaagagaaatctt
cccggaactcctgatccagatgctgaagtaattgctttatctccaaaaacacttatggct
acaaaccgattcatatgtgaaatatgcaagaaaggtttccaaagagaccaaaacctgcag
cttcaccgcaggggtcacaatcttccatggaagctaaggcaaagaacaaacaaagaagtt
cggaagaaggtttatatttgccctgagaaaacctgcgtccaccatgatccatccagggct
cttggcgacctcactggaataaagaaacatttcagcagaaaacatggtgagaagaagtgg
aagtgtgagaaatgttcaaagaaatacgctgttcaatccgactggaaagctcactctaaa
acttgtggtactagagagtacaagtgtgactgtgggacactgttttccagaaaagacagc
tttatcacccatagagctttttgtgacgccttagctgaagaaagtgcaagactcacttca
gttgcagccacaagcctaaatttcagaaacgatactgtgaatctgcctcatggatttgct
ggccgtggagttcaagatgttgctggcattcctcaatttggttcgggttttgctcaagat
ttcagtgggatgcctgcaccaggtttgcctgagatggttcgaatggctccagccaatctc
tttggctcttcttcacactttcctggatttgaaaacggcggtgcaacttcatcaaattcc
aataatctctccttatcgcaactgccacaagggttaaaagaagaaggtcgaaacgaagga
aatttaatggaaagcctttcatctctctattctgataatcaaaacaagcaatctaaagct
aatgcttcaccaatgtccgcaactgcgcttttgcaaaaagcggctcaaatgggttcaact
agaagcaatccgtccttctttggcaacagtttcggtgtaatgagctcatcttcctctcac
acagcacctactttcatggcatcaagcagtgcatcaatgagtgcaacaagcaacaagctt
gataagctcatgttacaaacaggaggcaaaccaagtgagcccagtctattaagcatgcat
caccctggttcaaattcattcgctcaaagcttgacgagggacttccttgggatgagcaat
gatcaatcaccacgtccatttttaccccaagaactagccaaatatgcagcaattggctca
accatgggtctcagtcaattcactagcagcaaccactaa

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