Gossypium hirsutum (upland cotton): 107891123
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Entry
107891123 CDS
T04793
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107891123
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107891123
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
107891123
NCBI-ProteinID:
XP_016671288
UniProt:
A0A1U8I4Z3
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Position
D09:complement(45260506..45263805)
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AA seq
452 aa
AA seq
DB search
MSGEAFSLPAASIGGFIQDPSNANPNPKPNANPAKKKRNLPGTPDPDAEVIALSPKTLMA
TNRFICEICKKGFQRDQNLQLHRRGHNLPWKLRQRTNKEVRKKVYICPEKTCVHHDPSRA
LGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDS
FITHRAFCDALAEESARLTSVAATSLNFRNDTVNLPHGFAGRGVQDVAGIPQFGSGFAQD
FSGMPAPGLPEMVRMAPANLFGSSSHFPGFENGGATSSNSNNLSLSQLPQGLKEEGRNEG
NLMESLSSLYSDNQNKQSKANASPMSATALLQKAAQMGSTRSNPSFFGNSFGVMSSSSSH
TAPTFMASSSASMSATSNKLDKLMLQTGGKPSEPSLLSMHHPGSNSFAQSLTRDFLGMSN
DQSPRPFLPQELAKYAAIGSTMGLSQFTSSNH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtgaggcgttttctttaccagctgcttcaataggagggtttattcaagaccca
agtaatgcaaaccctaaccctaaacctaatgctaatcctgctaagaagaagagaaatctt
cccggaactcctgatccagatgctgaagtaattgctttatctccaaaaacacttatggct
acaaaccgattcatatgtgaaatatgcaagaaaggtttccaaagagaccaaaacctgcag
cttcaccgcaggggtcacaatcttccatggaagctaaggcaaagaacaaacaaagaagtt
cggaagaaggtttatatttgccctgagaaaacctgcgtccaccatgatccatccagggct
cttggcgacctcactggaataaagaaacatttcagcagaaaacatggtgagaagaagtgg
aagtgtgagaaatgttcaaagaaatacgctgttcaatccgactggaaagctcactctaaa
acttgtggtactagagagtacaagtgtgactgtgggacactgttttccagaaaagacagc
tttatcacccatagagctttttgtgacgccttagctgaagaaagtgcaagactcacttca
gttgcagccacaagcctaaatttcagaaacgatactgtgaatctgcctcatggatttgct
ggccgtggagttcaagatgttgctggcattcctcaatttggttcgggttttgctcaagat
ttcagtgggatgcctgcaccaggtttgcctgagatggttcgaatggctccagccaatctc
tttggctcttcttcacactttcctggatttgaaaacggcggtgcaacttcatcaaattcc
aataatctctccttatcgcaactgccacaagggttaaaagaagaaggtcgaaacgaagga
aatttaatggaaagcctttcatctctctattctgataatcaaaacaagcaatctaaagct
aatgcttcaccaatgtccgcaactgcgcttttgcaaaaagcggctcaaatgggttcaact
agaagcaatccgtccttctttggcaacagtttcggtgtaatgagctcatcttcctctcac
acagcacctactttcatggcatcaagcagtgcatcaatgagtgcaacaagcaacaagctt
gataagctcatgttacaaacaggaggcaaaccaagtgagcccagtctattaagcatgcat
caccctggttcaaattcattcgctcaaagcttgacgagggacttccttgggatgagcaat
gatcaatcaccacgtccatttttaccccaagaactagccaaatatgcagcaattggctca
accatgggtctcagtcaattcactagcagcaaccactaa
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