KEGG   Gossypium hirsutum (upland cotton): 107891263
Entry
107891263         CDS       T04793                                 
Name
(RefSeq) CDK5RAP3-like protein isoform X2
  KO
K28116  CDK5 regulatory subunit-associated protein 3
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107891263
Membrane trafficking [BR:ghi04131]
 Autophagy
  ER-phagy
   ER-phagy recepters
    107891263
SSDB
Motif
Pfam: CDK5RAP3 KH_KRR1_1st TMPIT DUF3216 MgtC_SapB_C Noelin-1
Other DBs
NCBI-GeneID: 107891263
NCBI-ProteinID: XP_016671484
UniProt: A0A1U8I6X7
LinkDB
Position
D09:42243071..42248541
AA seq 571 aa
MQTAEDIRNLPIDITFSRLGEWLVDRKRIPSDWRKRLAAIRSKISKEFSALPKDIDPYFQ
TLDPEWIGYLEAKKIYDILLKLTPESRNIFGRLSGAAGSWEAIVRSFEKDHLYLGEAAQI
IIQNVNYEIPFQKKQVQKIQQQLAELERKEADIKRSAALSAAKYAEACQELGLQGKNVRL
ELLETANSLPSTFSRILEVINGDSVSRGIEYYSNFVRDAHTENDKSSLAVLLSLKDICEN
PPSLSVSAASETLDLENTHNDIDLGRGDIDVSADAIDWDISVDNAQIDWDIGTLEETDDG
GGGLGPYEIVNASDILQSSSPNEVAESDKTPLDKTENPPEISVSDISWDISVETPQVDVI
DEVSLPNIQLENQTYAPDSLPLTRGTREERSQLLETEYRNKILDDLYEMKAFLNQRLVEL
RNEDTLSLQNRVQAVAPLVLQQHTPDAIETIISDVSLAISLLTNRKTRDLIMILNSKRFL
DRLVSTLEEKKYHEAKLKEGLKDVAAKRMELQNSLSSSWPKQEAALAKTRELKKLCESTL
SSVFDGRPVHIIGEINALLNTGVSAHDLTYS
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgcaaacagcggaggacatccgtaatctcccaatcgacatcacattttctcgtcttgga
gaatggttggtagatcggaagagaataccgtctgattggagaaagagattggcggcgata
cgatccaagatatcgaaggagttctcggcgttgcctaaggatattgatccctattttcaa
acccttgaccctgaatggattggttacttagaggccaagaaaatatatgatattcttctt
aagttgactccagaaagccggaacatatttggtcggctatcaggtgctgctggatcttgg
gaagcaattgtgcgttcttttgagaaagatcatctataccttggcgaggctgctcaaata
attattcagaatgtaaactatgaaatcccatttcagaaaaaacaggtgcaaaagattcag
caacaactggctgaacttgaacgcaaggaagctgatataaaaagaagtgcagctctatca
gctgctaaatatgctgaggcttgccaagagcttgggttgcaggggaaaaatgtcaggctt
gaactcttagagactgctaattcgctcccaagtacatttagcaggattctagaagtcatc
aatggtgattctgtttcacgggggatcgagtattattctaattttgtcagagatgctcat
acagaaaacgataaatcttcacttgctgtcttgctgagcttgaaagatatttgtgaaaat
cctccatctttgagtgtgtctgcagcttctgagacccttgatttggaaaatactcataat
gacatagaccttgggaggggagatatagatgtcagtgcagatgctattgattgggatatc
tctgttgacaatgctcaaatagattgggatattggtactttggaagaaacagatgatggt
ggtggtggtttaggcccatatgaaatagttaatgccagtgacatcttgcagagttcttca
ccaaatgaagttgctgaatccgataaaaccccattagataaaacagaaaaccctcctgaa
atttctgtgtcagatatatcctgggacataagtgttgaaacaccacaagttgatgtgatt
gatgaagtaagcttaccaaatatacaattggaaaatcagacatatgctcctgattcctta
cctcttacccgaggaaccagggaggaaaggagccaacttttggagacagaatacagaaat
aagattctggatgatttatatgagatgaaggcatttttgaatcagcgattggtggagttg
aggaatgaagatactctgtccttgcaaaatcgagtccaagcagttgctcccttggtgcta
cagcagcatacacctgatgccatcgagacaattatatctgatgtttcattagcgatttca
ctgctgacaaataggaaaacacgggatttaatcatgattctcaactctaaaagattccta
gacagactggttagtacattggaggaaaagaaatatcacgaagcaaagttaaaagaagga
ttgaaggatgtggctgccaaacgtatggagcttcagaattctctatcttcttcatggcca
aagcaagaagctgcacttgcaaaaaccagggaactgaagaaactatgtgaaagtaccctt
tcatcggtatttgatggaagacccgttcatataattggagagatcaatgccttgttgaat
accggtgttagcgcgcatgatttgacttacagttag

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