Gossypium hirsutum (upland cotton): 107891263
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Entry
107891263 CDS
T04793
Name
(RefSeq) CDK5RAP3-like protein isoform X2
KO
K28116
CDK5 regulatory subunit-associated protein 3
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107891263
Membrane trafficking [BR:
ghi04131
]
Autophagy
ER-phagy
ER-phagy recepters
107891263
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CDK5RAP3
KH_KRR1_1st
TMPIT
DUF3216
MgtC_SapB_C
Noelin-1
Motif
Other DBs
NCBI-GeneID:
107891263
NCBI-ProteinID:
XP_016671484
UniProt:
A0A1U8I6X7
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Position
D09:42243071..42248541
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AA seq
571 aa
AA seq
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MQTAEDIRNLPIDITFSRLGEWLVDRKRIPSDWRKRLAAIRSKISKEFSALPKDIDPYFQ
TLDPEWIGYLEAKKIYDILLKLTPESRNIFGRLSGAAGSWEAIVRSFEKDHLYLGEAAQI
IIQNVNYEIPFQKKQVQKIQQQLAELERKEADIKRSAALSAAKYAEACQELGLQGKNVRL
ELLETANSLPSTFSRILEVINGDSVSRGIEYYSNFVRDAHTENDKSSLAVLLSLKDICEN
PPSLSVSAASETLDLENTHNDIDLGRGDIDVSADAIDWDISVDNAQIDWDIGTLEETDDG
GGGLGPYEIVNASDILQSSSPNEVAESDKTPLDKTENPPEISVSDISWDISVETPQVDVI
DEVSLPNIQLENQTYAPDSLPLTRGTREERSQLLETEYRNKILDDLYEMKAFLNQRLVEL
RNEDTLSLQNRVQAVAPLVLQQHTPDAIETIISDVSLAISLLTNRKTRDLIMILNSKRFL
DRLVSTLEEKKYHEAKLKEGLKDVAAKRMELQNSLSSSWPKQEAALAKTRELKKLCESTL
SSVFDGRPVHIIGEINALLNTGVSAHDLTYS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagcggaggacatccgtaatctcccaatcgacatcacattttctcgtcttgga
gaatggttggtagatcggaagagaataccgtctgattggagaaagagattggcggcgata
cgatccaagatatcgaaggagttctcggcgttgcctaaggatattgatccctattttcaa
acccttgaccctgaatggattggttacttagaggccaagaaaatatatgatattcttctt
aagttgactccagaaagccggaacatatttggtcggctatcaggtgctgctggatcttgg
gaagcaattgtgcgttcttttgagaaagatcatctataccttggcgaggctgctcaaata
attattcagaatgtaaactatgaaatcccatttcagaaaaaacaggtgcaaaagattcag
caacaactggctgaacttgaacgcaaggaagctgatataaaaagaagtgcagctctatca
gctgctaaatatgctgaggcttgccaagagcttgggttgcaggggaaaaatgtcaggctt
gaactcttagagactgctaattcgctcccaagtacatttagcaggattctagaagtcatc
aatggtgattctgtttcacgggggatcgagtattattctaattttgtcagagatgctcat
acagaaaacgataaatcttcacttgctgtcttgctgagcttgaaagatatttgtgaaaat
cctccatctttgagtgtgtctgcagcttctgagacccttgatttggaaaatactcataat
gacatagaccttgggaggggagatatagatgtcagtgcagatgctattgattgggatatc
tctgttgacaatgctcaaatagattgggatattggtactttggaagaaacagatgatggt
ggtggtggtttaggcccatatgaaatagttaatgccagtgacatcttgcagagttcttca
ccaaatgaagttgctgaatccgataaaaccccattagataaaacagaaaaccctcctgaa
atttctgtgtcagatatatcctgggacataagtgttgaaacaccacaagttgatgtgatt
gatgaagtaagcttaccaaatatacaattggaaaatcagacatatgctcctgattcctta
cctcttacccgaggaaccagggaggaaaggagccaacttttggagacagaatacagaaat
aagattctggatgatttatatgagatgaaggcatttttgaatcagcgattggtggagttg
aggaatgaagatactctgtccttgcaaaatcgagtccaagcagttgctcccttggtgcta
cagcagcatacacctgatgccatcgagacaattatatctgatgtttcattagcgatttca
ctgctgacaaataggaaaacacgggatttaatcatgattctcaactctaaaagattccta
gacagactggttagtacattggaggaaaagaaatatcacgaagcaaagttaaaagaagga
ttgaaggatgtggctgccaaacgtatggagcttcagaattctctatcttcttcatggcca
aagcaagaagctgcacttgcaaaaaccagggaactgaagaaactatgtgaaagtaccctt
tcatcggtatttgatggaagacccgttcatataattggagagatcaatgccttgttgaat
accggtgttagcgcgcatgatttgacttacagttag
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