Gossypium hirsutum (upland cotton): 107891319
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Entry
107891319 CDS
T04793
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107891319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107891319
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
107891319
Prokaryotic type
Archaeal type
TFB
107891319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
Zn_ribbon_8
DmmA-like_C
zinc_ribbon_6
Motif
Other DBs
NCBI-GeneID:
107891319
NCBI-ProteinID:
XP_016671561
UniProt:
A0A1U8HZY2
LinkDB
All DBs
Position
D09:complement(41519170..41524357)
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AA seq
312 aa
AA seq
DB search
MGDVYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLIVAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQESVQKSEEF
DIRRSPISIAAAVIYIITQLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHLAKIIPSWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgtgtattgttcggactgcaagcggcagacggaggtggttttcgatcactcg
gcgggagatacggtgtgttcggagtgcgggttagttttagagtcacactcgatcgatgag
acgtcggagtggagaaccttcgcaaacgagtcgggtgataacgatcccgtccgtgtaggt
ggtcccaccaatccgcttttggcggatggcggtttatctactgttattgctaagcctaac
ggtgcttctggtgagttcctctcgtcttcgttgggtcggtggcagaaccgtgggtcgaat
ccggatcgggggttgattgtcgctttcaagaccattgctaccatgtctgataggttgggt
ctcgttgcaaccatcaaggatcgagccaatgagatatataagaaggtggaagatcagaag
tctagcagaggaagaaatcaagatgcattgttggctgcttgcctatacattgcttgtaga
caagaggacaagcctcgcactgtcaaggaaatttgctctgttgccaatggagccacaaaa
aaagaaattggccgagcaaaagaatacatagtgaaacaactgggattggagactggccag
tctgtggagatgggaaccatacatgccggtgacttcatgaggcgtttttgttccaatctt
ggtatgaataatcaagcagttaaagctgcccaggaatcagttcagaagtctgaggagttt
gatataaggcgaagcccgatatcaattgcagctgctgttatttatatcataacacagctg
tctgatgacaagaagcctcttagagatatttcacttgctacaggagttgcagaagggaca
atccgaaattcgtacaaggatctttatccccatctggcaaagataataccaagttggtat
gccaaggaagaagatctcaagaatctatgtagtccttga
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integrated database retrieval system
