Gossypium hirsutum (upland cotton): 107891346
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Entry
107891346 CDS
T04793
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107891346
Spliceosome [BR:
ghi03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107891346
Other components
Complex C specific factors
107891346
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
107891346
NCBI-ProteinID:
XP_016671598
UniProt:
A0A1U8I5W8
LinkDB
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Position
A11:85253404..85256907
Genome browser
AA seq
853 aa
AA seq
DB search
MDEYQEMERFGMENDFEDAQWIEGEFYYKKRKEKRTQTKDDVIYGVFASDTDSEDGGSSS
SRKRRKEFGKKADLTKPVNFVSTGTVMPTQEIDNNSKVENDNSVPDDNGNDSRPGLGSGV
GLGFGGNDSLPKSDGNVVADEDGDSSFLPTAFGRKIKEGAQRREKERERLKMEKKSLGGR
REAGGGNGDVGSFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEAKMRPKNMGMGFN
DFKEAKLPGLQQLEEKKSVSQQPVGKAKERLWSKNAKGRKKEEYITVEELLAKKQEEGVE
IVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNLKLIVDLAELDIQKIDRDL
RNEKETASSLQKEKEKLEIEASHQKQHLANMEQIVSVLGQIEEENSSGKLTLESLANSFR
DLQKNYADDYKLCNLSCIACSLALPLFIRMFQGWDPLLNPSYRMEVISAWKDLLQIDGSY
DIWEDAATPYCQLISEVVLPAVRISGINTWEPRNPEPMLGFLESWEKLLPSPILQIILDT
VVMLKLSRAVDSWNPRKETVPIHVWVHPWLPMLGPKLEGLYQTIRMKLSNVLDAWHPSDP
SAYAILSPWKTVFDSVSWEQLMRQYIVPKLQIALQEFQINPADQKLDQFYWVMSWASAIP
IHLMVDLMEKFFFVKWLQVLYHWLCSKPDFEEIKNWYMGWKGLLPQELLANESIRNQLNC
GLEMMVQAADHVPVVQPGLRENVTYLKVREQRQFEAQQRAAAHAQQPAAAQMDGVPEMSL
KEVVETYAQQHELLFKPKPGRMHNGQQIYAFGNISVIVDSLNQKIFAQKDNGWSLVSLDD
LLKMHYNSLARRR
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatatcaagagatggaaaggtttgggatggagaacgattttgaagacgcacaa
tggatagagggcgaattctactacaaaaagcgcaaagaaaaacggactcagacaaaagat
gatgttatttatggtgtttttgcatctgataccgactctgaagacggtggttcttcttca
tcaaggaagagaaggaaagaattcgggaagaaagccgacttgacgaagcctgttaacttt
gtttctacaggtactgtaatgcctacccaagaaattgataataattctaaggtagagaac
gataatagtgttccggatgataatgggaatgatagcaggcctggattggggtctggcgta
ggtttagggtttggtggaaatgatagcttgcccaaaagtgatggcaatgttgttgctgat
gaggatggtgatagtagttttttgcctactgcctttgggaggaagataaaggaaggggca
caaaggagagagaaagagagggagaggttgaaaatggagaagaaaagcttaggaggcaga
agggaggctggaggtggtaatggtgatgttgggtctttcgagaagcatactaagggtatt
gggatgaagttgcttgagaaaatggggtataaaggaggtggtcttgggaagaatgagcaa
ggaattgttgcacctattgaggcgaagatgaggcctaagaatatggggatggggtttaat
gattttaaggaggctaagttgccagggctgcagcagttggaagagaagaaaagtgtgagt
cagcagcctgttgggaaagcaaaggagaggctttggtcaaagaatgcaaaggggaggaag
aaggaggagtatattacagtggaagagttgttagcaaagaagcaagaagagggtgttgag
attgttcagaaggtgattgatatgagggggccacaagttagagttttaaccaacttggag
aatttagatgctgaagagaaggcaagagagaatgatgttccaatgcccgagttgcagcat
aatttgaagttaattgttgacttggcagagcttgatattcagaagattgatagggattta
aggaatgaaaaagagacagcatcgagcttgcaaaaggagaaggaaaagttggagattgag
gcttcacatcagaagcaacatttggctaatatggagcaaattgttagtgtgcttggccag
attgaggaagagaactcatctgggaaattgaccttggagtcccttgcaaatagttttagg
gatttgcagaaaaattatgctgatgattacaaattgtgtaacttgtcctgcattgcatgt
tcattagctttgcctctgtttataagaatgtttcagggttgggatcctcttctgaatcca
tcttacaggatggaggtgatatcagcatggaaggatttattgcaaatagatggtagttat
gacatttgggaggatgcagcaacaccttattgtcagttgatctcggaagttgttttacca
gctgtgaggatatctggcataaacacatgggagcctaggaaccctgaaccaatgcttgga
tttttggaatcatgggaaaagttacttccgtcacctattcttcagatcattttggatact
gtggtaatgctgaaattgtcaagagcagttgactcatggaatccccgtaaggaaactgtt
ccaatccatgtctgggttcatccatggttgccaatgttggggccaaagttggagggcttg
tatcaaacaatacgtatgaagttgagtaatgttcttgatgcttggcacccaagtgatcca
tctgcttatgctatactatcaccttggaagactgtttttgattcagtgagttgggaacaa
cttatgcgccaatatatagtcccgaagttgcagattgctctgcaggagttccaaataaac
cctgcagatcagaagcttgatcagttttattgggttatgtcttgggcctctgcaattccc
attcatctcatggttgatttgatggagaaatttttctttgtaaagtggctgcaggttttg
tatcattggttgtgttcaaaacccgactttgaggagataaaaaattggtacatgggttgg
aagggacttctgccacaggagcttttggctaatgaaagcatccgcaatcaacttaactgt
ggtcttgagatgatggttcaggctgctgaccatgtaccagtagtgcagcctggtttgagg
gagaatgttacatatcttaaggtgcgtgagcagaggcagtttgaggctcagcagagagca
gccgcacatgcacaacagccagctgcagcccagatggatggtgttcctgagatgagtttg
aaggaggtagttgagacctatgcacagcagcatgagttactattcaagcccaagcctgga
aggatgcataatggtcaacagatatatgcctttggtaacataagtgtaatagttgattca
cttaaccagaaaatttttgcccaaaaggataatggttggtccctggtctcacttgatgat
ttgttgaaaatgcactataattctcttgcgaggagacgttga
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