Gossypium hirsutum (upland cotton): 107891439
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Entry
107891439 CDS
T04793
Name
(RefSeq) RNA-binding protein Y14-like
KO
K12876
RNA-binding protein 8A
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
ghi03015
mRNA surveillance pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107891439
09122 Translation
03013 Nucleocytoplasmic transport
107891439
03015 mRNA surveillance pathway
107891439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107891439
03041 Spliceosome [BR:
ghi03041
]
107891439
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107891439
Spliceosome [BR:
ghi03041
]
Complex C
Other components
EJC/TREX
107891439
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
107891439
NCBI-ProteinID:
XP_016671733
UniProt:
A0A1U8I689
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All DBs
Position
D09:39896960..39900202
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AA seq
199 aa
AA seq
DB search
MANADVEAVDFEPEEDDLMDEDAAGDASPQAPMPKLKSAITGGASASLSAPKKTKGRGFR
EEDADRHSRLASRDFESLGTDGGLGPQRSIEGWIILVSGVHEEAQEDDLHNAFGEFGEIK
NLHLNLDRRTGFVKGYALIEYEKFEEAKNAITTMDGAELLTQTINVDWAFSNGPSVGAFK
RKNMRSGRTHRSRSPRRRY
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgctgacgtggaagcggtggatttcgagccggaggaagatgacctcatggac
gaggacgccgccggcgacgcctcccctcaagctcccatgcctaagctcaagtccgccatc
actggcggtgcttcagcctctctttctgcccctaagaaaaccaagggccgtggcttccgc
gaggaagatgctgaccgccactcccgtctcgcctctcgcgacttcgagtcccttggcact
gatggtggcctcggtccccagagatctattgaaggatggattattttggtcagtggtgta
catgaggaagcccaagaggatgatttgcacaatgcatttggtgaatttggtgagatcaag
aatttgcatttaaatcttgatcgccgcactggatttgtcaagggatatgcactgattgaa
tacgaaaagtttgaagaagcaaagaatgccataacgacaatggatggagcagaacttctt
acacaaaccatcaatgttgattgggcctttagcaatggacctagtgttggagccttcaaa
cgaaaaaatatgagatctggacggacacatcgctccaggagtcctaggagaagatactaa
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