Gossypium hirsutum (upland cotton): 107891473
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Entry
107891473 CDS
T04793
Name
(RefSeq) transcription factor GAMYB-like
KO
K09422
transcription factor MYB, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107891473
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
107891473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_Rap1
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
107891473
NCBI-ProteinID:
XP_040956544
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Position
D09:39485195..39493287
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AA seq
484 aa
AA seq
DB search
MRKGQSDFSLVEEAGRRGNMRESCHLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKHSGL
SRCGKSCRLRWANHLRPDLKKGMFTPEEERRIVELHAKLGNKWARMAAELPGRTDNEIKN
FWNTRIKRLQRAGLPIYPPDVCLQVNLSQEESHSVASMPNLDSFGSNLVQSDAFGIPHVE
FENLELNQQFLSYSPELLNIPPKTIGLSHGYGHVFPMACPPKHLQESVSNYMSLPNQMTD
FACKENFDEPYKSSSPYDSDFSTNDQSSFGIPPGSDALLNSNFSPSEPLSGPMNLELPSY
QYSDNQQDSWVNSSVPLALVESVDTLIQSPPMKRAKSECFALQNSGLLEAVLYESKKLNS
SKDDSRQQSSNLMLDDVADFHLKDCELEFEAHCDPNSPSALSAASVLSEHTPVSGSSLDD
ESQFVESILGGNGKNETPNQMAISGLDDFLGRGQFGHDNGCVNDKPIVTDVIAALLGEDA
CCGY
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaaggtcagtctgatttttcattagttgaagaagctggtaggagaggcaacatg
agagaaagctgtcatttgaagaaagggccttggacttcagcagaagatgcgattttggtg
gactatgtaaagaagcatggtgagggaaattggaatgctgtccagaaacactctggactt
tcacgatgtgggaaaagctgtcgcctgcgttgggcaaaccacctaaggccggatttgaag
aagggcatgtttactccagaggaagagcgtcgtatagttgagctacatgcgaagttggga
aacaaatgggcacgaatggctgctgagttgcctggacgaactgataatgagataaagaac
ttctggaatacaagaattaagagactgcaacgtgctggcttgccaatttaccctcctgat
gtgtgcttgcaagtaaatttaagtcaagaagagagtcatagcgtggcttcaatgccaaat
ctggactcctttggttccaatctcgtgcagtcagatgcttttgggattccacatgtggaa
tttgagaatttagagctcaaccaacaatttttgtcttattcacccgaacttctcaacatt
cctccaaaaactattggtttgtcccatggttatggccatgtgttcccaatggcatgccct
ccgaagcatcttcaggaaagtgtcagcaactatatgtcattgcccaaccaaatgactgat
tttgcttgcaaggaaaattttgatgagccctacaagtcatcttctccatatgattctgat
ttcagtaccaatgaccaatcatcatttggtatacctcctggcagtgatgcccttctaaat
agtaatttctctccttctgagcccttgtctgggcctatgaacttggagctcccttcatac
caatattcagataatcaacaagatagctgggtcaattcttcagtcccactagctttggtt
gagtctgttgatactctgatccagtcccctccaatgaagcgggctaagtcagaatgtttt
gcactacaaaacagtggtctccttgaagctgtactttacgagtcaaagaagcttaatagc
tcaaaggatgattctcgtcagcagtcttctaatttgatgcttgacgatgttgctgatttt
cacctgaaggattgtgaattagaatttgaagcacactgcgacccgaattctccttctgct
ctttctgctgcatccgttcttagtgagcacactcctgttagtggaagctcattggatgat
gaatcacagtttgttgagagcattctgggaggcaacggcaagaatgaaactccgaatcag
atggctatttctggactagatgattttctgggacgtggtcagtttggtcatgacaatggg
tgcgtgaacgataaacccattgtaacagatgttatagcggctcttctcggtgaagatgct
tgctgtggctactag
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