Gossypium hirsutum (upland cotton): 107891536
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Entry
107891536 CDS
T04793
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107891536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107891536
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ghi03037
]
107891536
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107891536
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
107891536
Chromatin remodeling factors
SRCAP complex
107891536
INO80 complex
107891536
INO80 complex (yeast)
107891536
SWR1 complex
107891536
ASTRA complex
107891536
Cilium and associated proteins [BR:
ghi03037
]
Motile cilia and associated proteins
Dynein assembly factors
107891536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_19
AAA_18
Mg_chelatase
bpMoxR
AAA_25
TsaE
DnaB_C
AAA_7
AAA_28
AAA_11
Cdc6_lid
nSTAND3
NPHP3_N
Zeta_toxin
IstB_IS21
Rad17
Motif
Other DBs
NCBI-GeneID:
107891536
NCBI-ProteinID:
XP_016671857
UniProt:
A0A1U8I0U7
LinkDB
All DBs
Position
D09:38225696..38230823
Genome browser
AA seq
458 aa
AA seq
DB search
MDKMKIEEVQSTAKKQRIATHTHIKGLGLDPTGNAVPLAAGFVGQAEAREAAGLVVDMIR
QKKMAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMNSPHGIPVDLLDRL
VIIRTQIYGPSEMIQILAIRAQVEELVVDEESLAFLGEIGQSTSLRHAVQLLSPASIVAK
MNGRDNICKADLEEVSKLYIDAKSSAKILQEQQEKFIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatgaagatagaagaggttcaatcaacggccaaaaagcaaagaatcgctact
catactcacatcaaaggccttggtctcgatcccaccgggaatgccgttcctttggctgca
ggttttgtggggcaagcagaggcaagggaagcagctggtcttgtggtggatatgataagg
caaaaaaagatggctggccgtgcacttttgctggctgggcctcccggtactgggaaaaca
gctttggccttaggaatttcccaagagcttgggagcaaggttccattctgtccaatggtt
ggatctgaagtatactcttcagaagtaaagaaaactgaagttttgatggaaaacttccga
cgggctattggtctacgcatcaaggaaaataaagaggtctatgaaggagaggttactgaa
ctctctcctgaagaaacagagagcgtaacaggtggttatggtaaaagcattagccacgta
attattggattgaaaactgtcaaaggaacaaagcaactgaagttggaccctacaatttat
gatgccttgattaaagaaaaggtagctgttggagatgttatatatattgaagcaaatagt
ggagccgttaaaagggtgggcagaagtgatgcttttgccacagaatttgaccttgaagct
gaagaatatgtgccgcttcccaaaggagaagttcacaaaaagaaggagatagtgcaggat
gtaacattacatgatttggatgctgctaacgcacgacctcaagggggccaagacattttg
tctttaatgggtcagatgatgaagcccaggaagacagaaatcactgacaaattacgacaa
gaaataaataaggttgttaaccggtatattgatgaaggtgtggcagagcttgtcccagga
gttctattcattgatgaggttcatatgctggacatggagtgtttttcatacttgaatcgt
gctttagagagctcactatctccaatagtaatttttgctacaaatagaggaatatgtaac
gtaaggggtactgatatgaatagtcctcatggcatacctgttgacttattggacagattg
gtgatcatccgcacacagatttatggtccttctgaaatgatacagattttagccatccgt
gcacaggtggaagaactggttgtggatgaagaaagtctggcgttccttggagagattgga
caaagcacatctttaaggcatgcagttcaactgttatcacctgctagcattgtggcaaaa
atgaatggtcgagacaacatatgcaaggcggatcttgaggaagtaagcaagctatacata
gatgccaagtcttcggcaaaaattcttcaagagcaacaggaaaaattcatttcatga
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