Gossypium hirsutum (upland cotton): 107891694
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Entry
107891694 CDS
T04793
Name
(RefSeq) coatomer subunit beta'-2 isoform X2
KO
K17302
coatomer subunit beta'
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107891694
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107891694
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
107891694
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
107891694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_DCAF4
TPR_CcmH_CycH
Beta-prop_Nup120_160
WD40_like
Beta-prop_WDR75_2nd
WD_LRWD1
TPR_2
HEAT_GCN1
TPR_8
Motif
Other DBs
NCBI-GeneID:
107891694
NCBI-ProteinID:
XP_016672048
UniProt:
A0A1U8I750
LinkDB
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Position
D09:35798299..35808129
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AA seq
902 aa
AA seq
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MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLVKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIILTGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKGSRRIVIGYDEGTIMVKIG
REVPVASMDNSGKIIWAKHNEIQTVNIKSVGADFEVSDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSEGEYAVRESSSKIKIFSKNFQ
EKRSVRPTFSAERIFGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVQSYLDSGRPVDEQGVEDAFELLHENNERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGELERANEILPSIPKEHHNSVAHFLESRGMIEDALEVATDPDYRFELAIQLGKLGIAKE
IATEVQSESKWKQLGELAMSTGKLQMAEECMKHAMDLSGLLLLYSSLGDAEGISRLASLS
KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNK
VNPKAAESLSDPEEYPNLFEDWQLALTLESQVAETRGIYPPAADYLKHADRSHMTLVETF
RNMPTEEEPLENGDLDHENLEDQNGEEGSQEEAVVVDADSNDGAVLVNGNEPEEEWVLTP
DH
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgccactcagactcgaaattaagaggaaacttgctcaaagatcagagagagtaaaatct
gtagatcttcatccaactgaaccatggattctagcaagtttgtattctgggactgtttgt
atctggaattaccagtcacagaccatggctaaatcttttgaggtcactgagttgccggtt
aggtcggccaagtttgtagcacgcaaacagtgggttgttgctggagctgatgatatgttt
attcgtgtatacaattacaacaccatggataaggtcaaagtatttgaggcacatactgat
tacattagatgtgtggctgttcatcctactcttccatatgtgttgtcatcatctgatgat
atgctcgtaaaactttgggactgggagaagggttgggtgtgtactcagatatttgaggga
cattctcattatgtcatgcaagtgacctttaatcccaaagacactaacacttttgccagt
gcatctcttgaccgtactataaagatatggaaccttggctctcctgatccaaattttact
ttggatgcccatcagaaaggtgtaaattgcgttgattactttacaggtggtgataagccc
tatctgattactggttctgatgatcacactgctaaggtatgggactaccaaaccaagagc
tgtgttcaaacattggaaggccacacacacaatgtttctgcagtttgtttccatcctgaa
cttccaattattcttactggttctgaggatgggacggttcgtatctggcatgctaccact
tataggcttgaaaataccttgaattatggtcttgagagagtttgggcaattggatatatg
aaaggttcacgaaggattgtgattgggtatgatgaaggaactattatggtgaaaattggc
cgtgaagtacctgtagcaagtatggacaacagtgggaaaatcatatgggctaagcacaat
gaaattcaaactgtgaatattaagagtgttggagcagattttgaggtttctgatggagaa
agattgcccttggctgtcaaggaattgggcacctgtgatctataccctcaaagcttaaag
cataacccaaatgggaggtttgttgttgtttgtggagatggtgagtacatcatttatacg
gctttggcgtggagaaataggtcatttggttctgcattggaatttgtttggtcatctgaa
ggagagtatgctgttagagaaagctcatcaaagattaaaattttcagcaaaaatttccag
gaaaagaggagtgtccgtccaacattctccgctgagcgtatttttgggggtactttattg
gcgatgtgctccaatgattttatttgtttttatgattgggctgagtgcaggttgattcgt
cgaattgatgttactgtgaaaaatctctactgggccgatagtggtgatttggtggccatt
gccagtgatacatctttctatattctaaagtataatagggatgtagttcaatcttacttg
gatagtggaagaccagttgatgaacaaggagttgaggatgcatttgagcttcttcatgaa
aataacgaacgtgtcaggactggcatttgggttggggattgtttcatttacaacaactct
tcatggagacttaattactgtgtcggtggagaggtgaccactatgtttcatttggaccgt
cctatgtacttgctgggatatcttgcaagtcaaagtcgggtgtatctgatagacaaagag
tttaatgttatggggtacacattacttctcagcctaattgagtacaaaactcttgtgatg
cgtggagagttggaaagggccaatgaaattttaccttcaattcccaaagagcaccataat
agtgtggctcatttcctggaatcacgaggtatgatagaggatgctttagaagtagctaca
gaccctgattacagatttgagcttgccatacagcttggtaaattaggtattgctaaggag
atagccactgaagttcagagtgagtctaaatggaagcagttgggagaattagctatgtcc
actggaaagctacaaatggctgaggaatgcatgaagcatgcaatggacctgagtggttta
ctgctgctttattcctctttgggagatgcagaaggaatatcaagacttgcatccctttcc
aaagagcaagggaagaataatgttgctttcctttgtttattcatgttgggtaaattggag
gattgcctccagcttctggtggaaagcaatcggataccagaggctgctctgatggcacga
tcttatcttccaagcaaggtttcagaaatagtagcaatttggagaaaagacctcaacaag
gttaatccaaaagctgctgaatctttgtctgatcctgaagaatatcccaacttgtttgag
gattggcaacttgctcttactcttgaatctcaagtagcagaaacaaggggcatttatcct
cctgccgcagactatttgaaacatgctgatagatcacatatgacacttgtggagactttc
agaaacatgccaacagaggaggagcctcttgagaatggtgaccttgatcatgagaatcta
gaggaccagaatggagaagagggtagccaagaggaggctgttgttgtggatgctgattca
aacgatggtgcagtgctcgttaatggcaatgaacctgaagaagagtgggtgcttacgccg
gatcactag
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integrated database retrieval system
