Gossypium hirsutum (upland cotton): 107891721
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Entry
107891721 CDS
T04793
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
ghi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107891721
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107891721
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107891721
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107891721
03036 Chromosome and associated proteins [BR:
ghi03036
]
107891721
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107891721
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107891721
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107891721
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
DUF2415
ComGF
Motif
Other DBs
NCBI-GeneID:
107891721
NCBI-ProteinID:
XP_016672083
UniProt:
A0A1U8I789
LinkDB
All DBs
Position
D09:35398292..35406648
Genome browser
AA seq
514 aa
AA seq
DB search
MKGGDEEVAAPAGPPQPLDWKFSQVFGERTAGEEIQEVDIISAIEFDKTGDHLATGDRGG
RVVLFERTDAKDHGLSRRDLERTDYPISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQTANSALFLLSANDKTIKFWKVQEKKIKKISKIIADPSKAVGNGNVASSSNSNSPK
SFLANGVSPDRSCNHLGNDISFPPGGLPSLCLPVVVTSQETNLLARCRRVYGHAHDYHIN
SISNNSDGETFISADDLRINLWNLEISNQSFNIVDLKPANMEDLTEVITSAEFHPAHCNM
LAYSSSKGSIHLIDLRQSALCDSHAKLFEEPEAPGSRSFFTEIIASISDIKFAKDGRYIL
SRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDFYENDSIFDKFECCLSGDGLRVATGS
YSNLFRVFGCAPGSTETTTLEASKNPMRTQVQTPSRPSRSLNSITRVVRRAETLGVDANG
NSLDFTTKLLHLAWHPTENLIACVAANSLYMYYA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaggcgatgaggaggtcgcagctccggctggcccgccacagccgttggattgg
aaattttctcaggtatttggtgagcgaaccgctggagaagaaattcaagaagttgatatt
atttccgcaattgaattcgataaaactggggatcatcttgcaactggtgaccgtgggggc
cgtgtggttctttttgagaggacagatgcaaaggatcatggtctatcaagaagggatcta
gaaagaacggattatccaattagtcggcaccctgagttccgttacaagacagagttccag
agccatgagcctgagtttgactacctcaaaagcttggaaatagaggaaaaaatcaacaaa
atcagatggtgccaaacagccaacagtgcactgtttctcctctccgccaatgataaaacc
atcaaattttggaaggtacaagaaaagaagatcaagaaaatttctaaaattattgctgac
ccttcgaaagctgttggaaatggaaatgttgctagttcaagtaattcaaatagcccaaaa
tcttttcttgcaaatggagtctcccccgacagatcctgcaaccatttgggcaatgacatc
tctttcccaccaggaggccttccatcgctatgtttacctgtggtggtaacaagtcaggag
accaacctactggcgagatgtcgaagagtatatggccatgctcatgattatcatatcaac
tctatttcaaataacagtgatggcgaaacttttatatcagctgatgatttgcgtataaat
ctttggaacctggaaattagcaatcaaagtttcaatattgttgatttaaagcctgcaaac
atggaggatctaactgaggttataacatcagcagagtttcaccctgcccactgtaatatg
ttggcatatagtagctcaaagggctcgattcacctcattgatttgcggcaatcagctttg
tgtgattctcatgcgaaattgtttgaagaaccggaggcacctggttctagatcgtttttt
acagagataatcgcctcaatctcagatattaaatttgccaaggatggaagatatatactt
agccgtgattacatgactcttaagttatgggacataaacatggattcgggtccagttgca
acattccaggttcacgaatatttaagacccaagttgtgtgatttctatgaaaacgattca
atctttgacaaatttgagtgttgcctaagtggtgatggattgcgagttgcaacaggttcc
tacagcaatctgttccgtgtatttggttgtgcccctggaagcactgagacaacaactttg
gaagccagcaaaaatccaatgaggacacaagttcagacaccctcaaggccttccagatcc
ctaaacagcataacacgtgttgtacgacgagcagaaaccctcggagttgatgcaaatgga
aactctcttgatttcacgacaaagttgctgcacttagcgtggcaccccaccgaaaacttg
atagcttgtgttgctgctaacagcttgtacatgtactatgcataa
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