Gossypium hirsutum (upland cotton): 107891751
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Entry
107891751 CDS
T04793
Name
(RefSeq) ras-related protein RABF2b-like
KO
K07887
Ras-related protein Rab-5A
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
ghi04145
Phagosome
ghi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107891751
04145 Phagosome
107891751
04148 Efferocytosis
107891751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107891751
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107891751
04031 GTP-binding proteins [BR:
ghi04031
]
107891751
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
107891751
Endosome - Lysosome transport
107891751
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107891751
Exosomal proteins of other body fluids (saliva and urine)
107891751
Exosomal proteins of colorectal cancer cells
107891751
Exosomal proteins of bladder cancer cells
107891751
GTP-binding proteins [BR:
ghi04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
107891751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
AAA_24
AAA_16
AAA_22
ATPase
Motif
Other DBs
NCBI-GeneID:
107891751
NCBI-ProteinID:
XP_016672124
UniProt:
A0A1U8I8M3
LinkDB
All DBs
Position
D09:34641038..34645077
Genome browser
AA seq
201 aa
AA seq
DB search
MATTENKTINAKIVLLGDVGTGKSSLVLRFVRGQFVEFQESTIGAAFFSQTLAVDDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNLASFERAKRWIEELQAQGNSDMVMAL
AGNKADLLDAKNVETEEAKTYAQENGLFFVETSAKTSSNVNNIFYEIAKRIPRVQPSQNP
AGMVLMDRSAEQTARASCCSY
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggccaccactgaaaacaagaccatcaatgctaaaatagttctacttggggatgttgga
actggaaaatctagtcttgtgttgcgcttcgttaggggccaatttgtcgaatttcaggaa
tcaactattggtgctgcatttttctcccagacgttggcggtggatgatgcaactgtaaag
ttcgagatttgggatacggccggtcaagagcggtaccatagcttggcaccaatgtattac
agaggagctgcggctgcaattatcgtttacgatataacaaatctcgcatcatttgagaga
gctaaaagatggattgaagaacttcaagcacaaggcaattctgatatggtaatggcactt
gctgggaacaaagctgatttactggatgcaaagaatgtggaaacggaggaagcaaaaact
tatgctcaagagaacggccttttcttcgtggaaacttccgccaagacttcgtccaatgtc
aacaacattttctacgaaatagcgaaaaggatacctcgagtgcagccgtcacaaaatccc
gccggaatggttctcatggatagatctgcagagcaaacagcaagggcatcttgttgctcg
tattag
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