Gossypium hirsutum (upland cotton): 107891982
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Entry
107891982 CDS
T04793
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107891982
04121 Ubiquitin system [BR:
ghi04121
]
107891982
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107891982
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
107891982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
107891982
NCBI-ProteinID:
XP_016672419
UniProt:
A0A1U8I9G7
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All DBs
Position
D09:complement(25887509..25891597)
Genome browser
AA seq
1079 aa
AA seq
DB search
MSFQGRNRSRNPSQSTRQEWVPRGSSSTTTTVESSSTAASNSTPNVNQTSTRNDSKYRQT
GRPTNHRRDREKGRSETQMAVRKEVDPNLPQLVQEIQDKLIKSTVECMICYDMVPRSGAI
WSCSSCYSIFHLNCIKKWARAPTSVDLVAEKNQGFNWRCPGCQSVQFTSSKEIRYVCFCG
KRTDPPSDLYLTPHSCGEPCGKPLEKELGLGSRVMKDELCPHVCVLQCHPGPCPPCKAFA
PPRLCPCGKKVITTRCSDRKSVLTCGQRCGKLLECGRHQCERICHIGACDPCKVLINAPC
FCKKKVEVVICGDMVVKGKVKAEDGIFSCSSTCGKKLRCGNHYCAENCHPGPCGDCELMP
SKIRSCYCGKTSLQEQRQSCLDPIPTCSETCAKFLPCQVHRCDQVCHAGNCPPCLVLVTQ
KCLCGSTSRRVECYKTTLENERFTCDKPCGRKKSCGRHRCSERCCPLSNSNSLRSGGWDP
HFCQMACGKKLRCGQHSCESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPPPSC
QLPCSVPQPCGHSSSHSCHFGDCPPCSVPVAKECIGGHVVLRNLPCGSKDIRCNKLCGKT
RQCGLHACGRTCHPAPCDVSSGAEPGVRTSCGQTCGAPRRDCRHTCTAPCHPSAPCPDVR
CDFRVTITCSCGRLSATVPCDAGGCTGGFNADTVFEASIIQKLPVPLQPVESTGKKIPLG
QRKLMCDDECAKLERKRVLADAFDITPPNLDALYFGENSVTSEVLFDLYRRDPKWVLAVE
ERCKFLVLGKNRGTTSGLKVHVFCPMLKDKRDAIRIIAERWKLTISAAGWEPKRFIVVHV
TAKSKPPARIIGAKGSTSTGAVHPPVFDPLVDMDPRLVVSFLDLPRESDISALVLRFGGE
CELVWLNDKNALAVFSDPARAATAMRRLDHGSIYTGAIAFVQSGGASSANNAWGGTGPSS
AVKANPWKKAVVQELGWKEDSWGGDESLGVTSDPGSAWKGKDAPIAASVNRWSVLDSETG
VSSSSGAVRSEDPSKLAGVQSLSKMDSNAANSSSAGLLGGGLNGTEPLEVVDDWEKAYE
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcaaggccgaaatagatcaagaaacccttcacaaagcactcgtcaagaatgg
gttcctagaggatcttcatccacaaccaccaccgttgaaagcagctcaacggccgcctct
aattcaacccctaatgtcaaccaaacctcaactcgaaatgatagtaagtacagacaaact
ggtcggcccaccaaccataggagagatagggaaaagggaaggagtgagactcagatggcg
gtaaggaaggaggttgatcctaatttgccacagcttgtgcaggaaattcaggacaagctt
ataaagagtacggttgaatgtatgatttgttatgatatggtaccgaggtctggtgctata
tggtcgtgctcaagttgttattctatctttcacctcaattgtattaagaaatgggcgagg
gcacccacttctgttgatttggtggccgagaagaatcagggttttaattggcgttgtccg
ggctgtcagtctgtgcagttcacatcctctaaggagatacggtatgtttgcttttgtgga
aagaggaccgaccctccttctgatttgtacttgactccacattcatgcggggagccctgt
ggaaagccccttgagaaggagctgggattaggttctagggtgatgaaggatgaactttgc
cctcatgtttgtgtcttgcaatgtcaccctggtccatgtcctccttgtaaggcgtttgct
ccaccacgtttgtgtccttgtggtaagaaagttattacaaccagatgttctgataggaag
tcggttcttacttgtggtcagcggtgtggtaaacttcttgagtgtgggcgccatcagtgt
gaacgtatttgccatatcggagcttgtgatccttgcaaggttctaattaatgccccctgt
ttctgcaagaaaaaggttgaagttgtcatctgcggtgacatggttgtgaagggaaaggtg
aaagcagaagatggcattttttcttgtagttcaacatgtggaaagaagcttagatgtggt
aaccattactgtgctgaaaattgccatcctggtccttgtggggattgtgaactgatgcca
agcaagatcaggtcttgttactgtgggaaaacaagcttgcaggagcaaaggcaaagttgt
ttggacccaattccaacttgttcagagacatgtgccaagttccttccttgtcaagtgcac
cgatgtgaccaagtctgtcatgctgggaattgtccaccttgtctagttcttgtcacccaa
aaatgcctctgtggatcgacttctcggagggtggaatgctacaaaacaacacttgaaaat
gagagatttacatgtgacaagccttgtgggcgtaagaagagttgtggtagacatcggtgt
agcgagcgatgctgccctctctcgaactctaatagtcttcgctccggtggttgggatcca
cacttctgccaaatggcatgtgggaagaagctgaggtgtggacagcattcttgtgaatct
ctttgtcacagtggtcactgccctccatgcttggaaacgatctttactgatttgacatgt
gcttgtggaagaacttcaatccctcctccattgccttgtggtacaccaccgccttcatgt
caacttccatgctcagttccgcagccttgtggccattcatcttctcacagctgccatttt
ggagactgtccaccttgttctgtgcctgtggcgaaggaatgcattggaggacatgttgtt
cttaggaaccttccttgtgggtcgaaagatatcagatgtaacaagctctgcgggaagacc
aggcagtgtggattacatgcatgtgggagaacttgtcacccagctccatgtgatgtatca
tctggagctgaaccaggtgtcaggacctcttgtgggcagacatgtggtgcccctcggaga
gactgcaggcatacatgtactgcaccttgtcatccctctgcaccatgtcctgatgttagg
tgtgattttcgagttacaatcacgtgttcttgtggccggctaagcgcaactgtcccttgc
gatgctgggggctgtactggtggtttcaatgccgatacagtgtttgaagcttctattatc
caaaaattgcccgtgcctcttcaaccagtggaatcaactggcaaaaagattcctcttgga
caaaggaagcttatgtgtgatgatgaatgtgctaagttggagcgcaaacgggttcttgca
gatgcctttgacatcactcccccaaatttggacgcactttattttggtgagaattcggtt
acgtcagaggtgctttttgacctgtacaggcgtgatccgaagtgggttctagctgtagag
gagagatgcaagtttttggtactcggcaagaacagaggaacaacatcgggtctgaaggtt
catgtgttctgtccaatgctgaaggataagagagatgctatcaggataatagcagaaagg
tggaagcttactattagtgctgctggttgggagcccaaacgttttattgtggttcatgtt
actgccaaatcaaaaccaccagctcgcatcattggggctaaagggtcgaccagtactggg
gcagtacaccctcctgtttttgatcctctagtagacatggatccaaggcttgttgtttct
ttcctagatttgccccgagaatctgatataagtgcattagtgttgaggtttggtggggag
tgtgaacttgtttggttgaatgacaagaacgcattggctgtatttagtgatcctgctcga
gctgcaacggctatgaggagattggatcatggatcaatttatactggggctattgccttt
gttcaaagtggtggagcatcatctgctaataatgcgtggggaggaacagggccaagttct
gctgtaaaggcaaatccatggaagaaggctgtggtgcaggagcttggttggaaggaagat
tcatggggtggtgatgagtctcttggtgtcacttcagatccgggttctgcatggaaaggc
aaagatgctccaattgctgcttcagttaaccgctggagtgttctggattctgaaacaggt
gtaagctcatcttctggagcagttcgatcagaagatccttcaaagctggctggggttcaa
tccttgtcaaaaatggattcaaatgctgccaattcaagttcagctgggctgctgggtggg
ggtttaaatggaacagagccattggaggttgtagatgattgggaaaaggcttatgaatga
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