KEGG   Gossypium hirsutum (upland cotton): 107892251
Entry
107892251         CDS       T04793                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107892251
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107892251
   03041 Spliceosome [BR:ghi03041]
    107892251
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107892251
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107892251
Spliceosome [BR:ghi03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107892251
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 BRAP2 RRM_Nup35 SF3a60_bindingd
Other DBs
NCBI-GeneID: 107892251
NCBI-ProteinID: XP_016672764
UniProt: A0A1U8IAH1
LinkDB
Position
D09:9634333..9637249
AA seq 371 aa
MDPRGGDAIPDGETNDFRSSDHPDDDKSHPHTGDGASPGKIFVGGLARETSSAQFLEHFG
KYGEITDSVIMKDRKTGQPRGFGFVTYAEPSVVDKVIEDTHIINGKQVEIKRTIPKGAAG
SKDFKTRKIFVGGIPSTVSEDEFKDFFTQYGVVREHQIMRDHATNRSRGFGFITFETEQA
VDDLLEKGNKIEFAGAQVEIKRAEPKKPNPPPPPSKRYNDSRTAYGGGFGDGYGRYGGGG
FGGGYNRSSGAYGGRAGGFGAYGGGEFGSYGGYGGGGSGGIGPYRGEPSLGYSGRYGGNF
NRGYDMGSGYGGPGEFYGGYGAGAAGGGYGSSYDAGLGGGYGGGAAGGSSFYGSRGGYSG
AGSGRYHPYGR
NT seq 1116 nt   +upstreamnt  +downstreamnt
atggaccctcgaggcggtgatgccatccccgacggcgaaaccaacgattttagatcctcc
gaccatcccgatgatgacaagtctcaccctcacaccggggatggagctagtcctggcaaa
atttttgtaggaggtttagcgagagagacaagttctgcacaatttcttgagcatttcggt
aaatatggtgaaattacggattctgtgataatgaaggaccggaaaacgggacagcctcgt
gggtttgggtttgtgacttatgcagagccttctgtagttgataaagtcatcgaggacact
catattattaatgggaaacaagtggagattaagagaacaataccaaagggtgctgctgga
agtaaggatttcaagactaggaagatttttgtaggtggaattccttcaactgtatccgaa
gatgagttcaaggacttctttacacaatatggagtagtccgagaacaccaaatcatgcgg
gatcatgctaccaatcgttctcgtggttttgggttcatcacttttgaaactgagcaagca
gttgatgatcttttggagaagggaaacaagattgagtttgccggtgcacaggtggagata
aaaagggcggagccgaagaaaccaaatcctcccccgcctccatccaaacgatataatgat
tctaggactgcatatggtggcggattcggagatggttatggtagatatggaggtggtgga
tttggtggtggttataatagatcaagtggtgcgtatgggggtcgagctggtggttttggg
gcatatgggggtggtgagtttggcagttatggaggttatggtggtggtggcagtggtggt
atagggccatacagaggagagccgtcccttggatactcgggtcgctatggaggaaatttc
aacagagggtatgacatgggaagtggctatggaggcccaggtgagttttatgggggatat
ggtgctggagctgctggtggtggatatggtagtagctacgatgcgggccttggtggcggc
tacggtggtggtgctgcaggagggagttctttctatggaagtcgaggggggtatagtggt
gcgggaagtggtcgataccatccctatggaagatag

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