Gossypium hirsutum (upland cotton): 107892319
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Entry
107892319 CDS
T04793
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107892319
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107892319
04147 Exosome [BR:
ghi04147
]
107892319
04090 CD molecules [BR:
ghi04090
]
107892319
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107892319
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107892319
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107892319
CD molecules [BR:
ghi04090
]
Proteins
107892319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
RsgA_GTPase
Zeta_toxin
ABC_ATPase
AAA_21
AAA_15
AAA_25
AAA_23
DLIC
Motif
Other DBs
NCBI-GeneID:
107892319
NCBI-ProteinID:
XP_016672860
UniProt:
A0A1U8I3Q4
LinkDB
All DBs
Position
D09:7343550..7348202
Genome browser
AA seq
1255 aa
AA seq
DB search
MADERKSIEEVESSPLKKKNRCIRSIFMHADNVDRFLMAAGFIGGVVDGTVAPLMIYLNG
RLFNNLDASSKDAAADMVTRNVHHVALLLILTACGGWVGCFTEGFCWTRTSERQATRMRS
RYLKAILRQDVGYFDLNVTSTAEVVTSVSNDSLIIQEVISEKIPHLIARGTSFIGAYIIA
FLVLWKLALLIFPFVLLLVIPSLIYGKILLSLARKTQMEYKLASTIAEQAISSIRTVYAF
VGENKTSIKFSEALQGSVKLGLKQGWAKGLALGSSGITHLIWAFVTYYGSRLIMYHGAKG
GTIYIVGTCITFGGHYLVASLSTLKPLFEACSAAERINEVIKRIPKIDLGNMEGEILDNV
MGEIEFKQVEFAYPSRLENIIFKDFSLKIPAGKAVALVGSSGSGKSTVISLLQRFYDPIG
GDIALDGVPIYKLQLKWFRSQMGLVSQEPTLFATTIKENILFGKEDAEMEEIIEAAKASN
AHNFISELPQGYDTQVGERGIQLSGGQKQRIAIARAIIKAPKILLLDEATSALDSESECI
VQEALDKASVGHTTIIIAHRLSTIRHADLIAVVQDGQVTETGSHDELMGNEMGLYPMLVQ
LQHTEQEQVKEKGDKDLSINAIDINDASSHRLSLASRTSSANSVAANHSSLCEEMNVEDK
KLPAPSFKRLLAMNLPEWKEAILGCLGAVLYGAVQPLSAFTMGLMISMFFLSDHGEIKKK
AKVYALSFLGIGLFSLIINVIQHYNFAYMGEHLTKRIREGMLSKILTFEVGWFDQDENSS
GTVCSRLAKDASVVRSLVGDRMSLLMQTISGVTLACVMGLFLSWRLALVMIVLQPLIIFS
LYTRMVLLKSTSKKAIKAQQDSSKLAADAVSNHRTITAFSSQDRILKMMEKAYEGPRKES
VRQSWFTGLGFGSAQFLTACIVAFNFWYGGKLISQGYISSEALIQTFLILVSTGLVIAEA
ASMTSDLVKSSEVVASLFAILDHCTRIGPDDSNGYIAEEITGHVEIHDVDFAYPARPNVI
ILKNFSFTVEAGRSTALVGQSGSGKSTIISLIERFYDPLKGVVKIDGRDIKSYNLRTLRK
HIALVSQEPTLFVGTIRENILYGALDETDESEVIEAAKAANAHDFIAGLGNGYETWCGDR
GVQLSGGQKQRIAIARAVLKKPTILLLDEATSALDSKSEKVVQEALERLMVGRTSVVVAH
RLSTIQNCNLIAVLEQGKVVEKGNHSSLLAKGSTGAYYSLVNLQRKTHNSTQSFK
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgagagaaagagcattgaagaggtcgaaagcagtcctttgaagaagaaaaac
agatgcatacgatccatattcatgcatgcagataacgtggataggtttttgatggctgct
ggtttcatcggaggagttgtcgatggcactgttgcacccttgatgatatatttgaatggc
cgtttgtttaacaatcttgatgcttcaagcaaagatgcagctgcagatatggtcacccgc
aacgttcaccacgttgcattgttactgattttgacggcttgcgggggatgggttgggtgt
ttcacagaaggattttgctggacaagaacaagtgaaagacaagccacaagaatgagaagt
agatatttgaaagctattctaaggcaagatgtaggctactttgatttgaacgtaactagc
acagctgaagtagtcacaagcgtttccaatgatagtctcataattcaagaagttatcagt
gaaaagattccacacttgattgcaagaggtacttcatttattggagcttacataatagct
tttctggtactgtggaaattagctcttttgatttttccatttgtactgttgctggtgatt
cctagtttaatatatgggaagattttactgagtctggcaaggaagacacaaatggagtat
aagttggcaagcacaattgcagaacaggcaatatcttcaataagaactgtttatgccttt
gttggtgaaaacaaaacctccattaagttttctgaagctctacaaggatctgtgaaattg
gggttgaagcaagggtgggcaaaaggtttggcccttggaagcagtggtattactcacctt
atttgggctttcgttacttactatggtagcagattgatcatgtatcatggagccaaggga
ggaactatttacatagtgggcacctgtattacttttggtggacactaccttgttgctagt
ttatctaccttgaagcctttatttgaagcatgttcagctgcagagcgtataaatgaagtg
ataaaaagaatcccaaagattgatttaggcaatatggaaggggaaattttggataatgtt
atgggagaaattgaattcaaacaagttgagtttgcatatccgtcaaggcttgagaacata
attttcaaggattttagtctcaaaattccagcaggcaaggctgtagccttggtaggcagt
agtggatcaggaaaatccacagtgatttcattgttgcaaaggttttatgacccaattgga
ggagacatagctcttgatggggttcctatttataaactgcagctcaagtggtttaggtca
caaatgggattggtcagtcaagagcctacactatttgcaaccaccattaaagagaacata
ctttttggcaaggaagatgctgaaatggaagagattattgaagctgctaaagcttccaat
gcccataatttcatatcagagttgcctcaaggatatgacacacaggttggggagagaggg
attcaattgtctggtggccaaaaacagagaattgccatagcaagagctataataaaagca
cccaaaatccttctccttgatgaggcaacaagtgcattagactccgaatccgaatgtatt
gtgcaagaagctcttgataaggcctcggtcgggcatacaacaataatcattgcacaccgc
ctttctaccattagacatgcagatttaattgcagttgtccaagatggccaagtcacggaa
actggttcacatgatgagttaatgggaaatgaaatgggcctttatcccatgctagtgcaa
cttcaacatacagaacaagaacaagttaaggagaaaggtgataaagatttgtctatcaat
gcgatcgacataaatgatgctagcagtcatcgactttctttagcaagccgaacaagttca
gccaattcggtagcagccaatcattcttcactatgtgaagaaatgaatgttgaggataaa
aagttgcctgcaccatcttttaagagattgttggccatgaatttaccagagtggaaagaa
gcaatactgggatgcttaggtgcagtcttatatggtgcagtgcaaccactttcagctttc
acaatgggattaatgatatcaatgttttttctctcagatcatggtgaaattaaaaaaaaa
gcaaaggtttatgctttgagttttcttgggattggtttgttttcactgataattaatgtt
attcagcattataattttgcttacatgggggagcacttgacaaagaggattagagagggg
atgctttcaaagatactgacttttgaagttggttggtttgaccaagatgagaattctagt
ggcactgtttgctctagactagcgaaagatgccagtgtggtgagatctttggtgggcgat
cggatgtctcttctcatgcaaaccatctccggtgtaactctagcttgtgtcatggggtta
ttcctttcgtggcgacttgcccttgtaatgatagtgctccagccactcattatctttagc
ttgtacacccgaatggttttactcaaaagcacgtctaagaaagccatcaaagcacaacaa
gatagtagcaagcttgctgctgatgcggtgtcgaaccatcgaaccatcaccgccttctca
tctcaagaccgaattctgaaaatgatggaaaaggcttatgaaggtccaagaaaggagagt
gttaggcaatcttggtttacaggtcttggatttggatcagctcaatttcttacagcatgc
attgtggctttcaatttttggtatggtggcaaactcatctctcagggatatatcagttcg
gaggctcttatccaaacattcctcattttggttagcactggacttgtaatagctgaagct
gcaagcatgacatcggacttggtcaagagttccgaggttgttgcatctttgtttgctatc
ttagaccattgtacaagaatcggacccgatgactctaatggttacattgccgaagaaatt
acaggccatgtagaaatccatgatgtcgattttgcatatcccgctaggcctaatgtgatc
atcctaaagaacttctcattcactgttgaagctggaagatcaacagcattggtaggacaa
agcggttctggaaaatcaacaatcattagtttaatcgagaggttttacgatcctctcaaa
ggagttgtgaagatagatggtcgagatataaagtcgtacaacctaaggacattgaggaaa
cacatagcacttgttagccaagagccaacattgtttgttggcacaataagagaaaacatc
ttatacggagcattagatgaaactgatgaatctgaagtcattgaagctgctaaagcagcc
aatgcccacgatttcattgcaggccttggaaacggttacgaaacatggtgcggagataga
ggagtgcaattatccggtggccaaaagcagcggatcgcaatcgcccgagcagtactaaaa
aagcctacaatcttactactagatgaagcaaccagcgcacttgacagtaaatctgagaaa
gtggttcaagaggcattagagaggttaatggtggggagaaccagtgttgttgtggcacat
aggctaagcaccattcaaaactgtaatcttattgcagtgttagagcaagggaaagtggtg
gagaaaggtaaccattcatctctgttagccaaggggtcaacgggagcttactactctttg
gttaatcttcaaagaaaaacccataattctactcagtcatttaaataa
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