Gossypium hirsutum (upland cotton): 107892338
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Entry
107892338 CDS
T04793
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107892338
03036 Chromosome and associated proteins [BR:
ghi03036
]
107892338
Transcription factors [BR:
ghi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
107892338
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
107892338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
CDC45
Motif
Other DBs
NCBI-GeneID:
107892338
NCBI-ProteinID:
XP_040957567
LinkDB
All DBs
Position
D09:complement(6746811..6753047)
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AA seq
639 aa
AA seq
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MTDGHLFNNISLGGRGGTNPGQLKISSGGILWKKQGGGKAVEVDKSDILGVTWMKVPRTN
QLGVRIKDGLYYKFTGFRDQDVASLTSFFQNNCGIAPEEKQLSVSGRNWGEVDLSGNMLA
FMTGTKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFREKIMSVADVGAGVEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSTLSIN
EDLLNTKYKDRLEPSYKGLIHEVFTTIMRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISSKGLKIMNLGDVRTTDGVAEILQNDDDDAVDPHLERIKNEAGGDESDE
EDEDFVLDKDDGGSPTDDSGEDDSDASDSGDEKEKPAKRDPRKEASSSKATKKKSKDGQD
DGKKKKRRKKDPNAPKRAMSGFMFFSQVERENIKKTNPGASFAEISRILGEKWKKLSEEE
KEPYEAKAKVDKRRYDVERNAYKNPQPMNIDSGNESDSE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggccatctcttcaacaacatctccctcggcggccgaggtggcacgaatcct
ggacagcttaaaatttcttcaggggggattttatggaagaaacaaggaggtggaaaagct
gtagaagttgataagtctgatatcttaggggttacatggatgaaggtccctaggacaaat
caacttggtgttagaatcaaagatgggttgtattacaaattcactggattccgtgaccag
gatgttgccagtttgaccagtttttttcagaataattgtggaatagccccagaagaaaag
cagctttctgtcagtggtcgtaattggggagaagttgatttaagtgggaatatgcttgcc
tttatgactggtacgaaacaagctttcgaagtgtctttagcagatgtgtcacaaacacag
cttcaaggaaaaaatgatgtcatcttggagttccatgtggatgatacaactggagctaat
gagaaagattcactgatggagataagtttccacatacctaattctaatacccaatttgtt
ggtgatgaaaaccgcccacctgctcaggtttttcgtgaaaaaatcatgtcagtggccgat
gttggtgctggagttgaggaagctgttgttactttcgagggcattgcaatcctcacacca
aggggtcggtatagtgtcgaacttcatctttcattcttaagactccaagggcaggcaaat
gatttcaaaattcagtatagcagtgttgttcgcctgtttttgcttccaaagtccaaccaa
cctcacacttttgttgttgtcacacttgatccacctatccgcaaagggcaaactttgtac
ccccatattgtcatgcagtttgaaactgattatgtcgttcaaagcaccttgtccataaat
gaggatcttttgaatacaaagtacaaggacaggttggaaccttcttacaagggactcatc
catgaagtgtttaccacaataatgcgtggtttatctggtgcaaaagttacaaagccagga
aaattccgtagctgccaagatggttatgcggtcaagtcttccctgaaagctgaagatggt
gtcctgtatccacttgaaaagagcttcttctttctacccaaaccacctacacttattctt
catgaggagattgactatgttgaatttgagaggcatgctgctggtggctcaaatatgcat
tactttgatcttctcataagattaaaaactgagcaagaacatttatttcggaatattcag
agaaatgaatatcacaatttgtttgactttatcagttcgaagggtttgaagattatgaac
cttggagatgtacggaccacagatggggtggctgaaattctccaaaatgatgatgatgat
gctgttgatcctcatcttgaacgcattaagaatgaagctggtggggatgaaagtgatgag
gaggatgaggatttcgttcttgacaaggatgatggaggatcaccaactgatgattctggg
gaagatgattcggatgctagtgacagtggagatgagaaagagaagcctgccaaaagggat
cccagaaaggaagcttcttcttctaaggcaactaagaaaaaatctaaagatggacaagat
gatgggaagaagaaaaaaaggagaaagaaggatccaaatgcaccaaagagggctatgtcg
ggtttcatgtttttctcacaagtggagagggagaacataaagaaaactaatcctggagct
tcgtttgctgagatatcgagaatactcggagagaagtggaaaaagctgtcagaggaggaa
aaagaaccatatgaagcaaaggctaaagtagataaaagacgatacgatgttgaaaggaat
gcatataaaaatcctcagccgatgaacatagattcaggaaatgaatctgacagtgaataa
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