Gossypium hirsutum (upland cotton): 107892362
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Entry
107892362 CDS
T04793
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107892362
03036 Chromosome and associated proteins [BR:
ghi03036
]
107892362
Transcription factors [BR:
ghi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
107892362
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
107892362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
CDC45
Motif
Other DBs
NCBI-GeneID:
107892362
NCBI-ProteinID:
XP_040933411
LinkDB
All DBs
Position
A09:complement(6806316..6812553)
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AA seq
639 aa
AA seq
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MTDGHLFNNISLGGRGGTNPGQLKIYSGGILWKKQGGGKAVEVDKTDILGVTWMKVPRTN
QLGVRIKDGLYYKFTGFRDQDVASLTSFFQNNCGIAPEEKQLSVSGRNWGEVDLSGNMLA
FMTGAKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFREKIMSVADVGAGVEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSTLSIN
EDLLNTKYKDRLEPSYKGLIHEVFTTVMRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISSKGLKIMNLGDVRTTDGVAEILQNDDDDAVDPHLERIKNEAGGDESDE
EDEDFVLDKDDGGSPTDDSGEEDSDASDSGDEKEKPAKRDPRKEAASSKATKKKSKDGQD
DGKKKKRRKKDPNAPKRAMSGFMFFSQVERENIKKTNPGASFAEVSRILGEKWKKLSEEE
KEPYEAKAKVDKRRYDVERNAYKNPQPMNIDSGNESDSE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgactgacggccatctcttcaacaacatctccctcggcggccgaggtggcacgaatcct
ggacagcttaaaatttattcaggggggattttatggaagaaacaaggaggtggaaaagct
gtagaagttgataagactgatatcttaggggttacatggatgaaggtccctaggacaaat
caacttggtgttagaatcaaagatgggttgtattacaaattcactggattccgtgaccag
gatgttgccagtttgaccagtttttttcagaataattgtggaatagccccagaagaaaag
cagctttctgtcagtggtcgtaattggggagaagttgatttaagtgggaatatgcttgcc
tttatgactggtgcgaaacaagctttcgaagtgtctttagcagatgtgtcacaaacacag
cttcaaggaaaaaatgatgtcatcttggagttccatgtggatgatacaactggagctaat
gagaaagattcactgatggagataagtttccacatacctaattctaatacccaatttgtt
ggtgatgaaaaccgcccacctgctcaggtttttcgtgaaaaaatcatgtcagtggccgat
gttggtgctggagttgaggaagctgttgttactttcgagggcattgcaatcctcacacca
aggggtcggtacagtgtcgaacttcatctttcattcttgagactccaagggcaggcaaat
gatttcaaaattcagtatagcagtgttgttcgcctgtttttgcttccaaagtccaaccaa
cctcacacttttgttgttgtcacgcttgatccacctatccgcaaagggcaaactttgtac
ccccatattgtcatgcagtttgaaactgattatgtcgttcaaagcaccttgtccataaat
gaggatcttttgaatacaaagtacaaggacaggttggaaccttcttacaagggactcatc
catgaagtgtttaccacagtaatgcgtggtttatctggtgcaaaagttacaaagccagga
aaattccgtagctgccaagatggttatgcggtcaagtcttccctgaaagctgaagatggt
gtcctgtatccacttgaaaagagcttcttctttctacccaaaccacctacacttattctt
catgaggagattgactatgttgaatttgagaggcatgctgctggtggctcaaatatgcat
tactttgatcttctcataagattaaaaactgagcaagaacatttattccggaatattcag
agaaatgaatatcacaatttgtttgactttatcagttcgaagggtttgaaaattatgaac
cttggagatgtacggaccacagatggggtggctgaaattctccaaaacgatgatgatgat
gctgttgatcctcatcttgaacgcattaagaatgaagctggtggggatgaaagtgacgag
gaggatgaggattttgttcttgacaaggatgatgggggatcaccaactgatgattctggg
gaagaagattcggatgctagtgacagtggagatgagaaagagaagcctgccaaaagggat
cccagaaaggaagctgcttcttctaaggcaactaagaaaaaatctaaagatggacaagat
gacgggaagaagaaaaaaaggagaaagaaggatccaaatgcaccaaagagggctatgtcg
ggtttcatgtttttctcacaagtggagagggagaacataaagaaaactaatcctggagct
tcgtttgctgaggtatcgagaatactcggagagaagtggaaaaagctgtcagaggaggaa
aaagaaccatatgaagcaaaggctaaagtagataaaagacgatacgatgttgaaaggaat
gcatataaaaatcctcagccgatgaacatagattcaggaaatgaatctgacagtgaataa
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