KEGG   Gossypium hirsutum (upland cotton): 107892485
Entry
107892485         CDS       T04793                                 
Name
(RefSeq) serine/threonine-protein kinase ATM
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    107892485
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ghi01001]
    107892485
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghi03032]
    107892485
   03036 Chromosome and associated proteins [BR:ghi03036]
    107892485
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107892485
Enzymes [BR:ghi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     107892485
Protein kinases [BR:ghi01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   107892485
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    107892485
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    107892485
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    107892485
SSDB
Motif
Pfam: PI3_PI4_kinase FATC
Other DBs
NCBI-GeneID: 107892485
NCBI-ProteinID: XP_040956968
LinkDB
Position
D09:47235865..47282505
AA seq 2608 aa
MELPSNAQVEISLRSSLISKEFDCGWQLIWSHLMHGLPTFSNVTPVVDAALALLGSIISN
VSAVLHTSGLLVSKRDLSNTCVVPHDAWDLRLFKGMPSLCTLYFIACYFSRKGSQGDLRD
ILHLRKYLLRATLGSLSWNEPSLLNERLVLLLPAAVYALCAGCEPFTQCYKEIHLLQSFV
DVIEVADDWIKADEYDHEKQLENFECSIEVLANIDLDSIIQVSSSHFHQSLRLPRQLRES
LMQEMESCILGLLADLKFEKKPLSDIFFICALLCNFIYGLYFTRNGEEVSSFLSKLGQFL
LELLNYAVNVIQENKNDSRSLGFLGFTSSFNQKSAIVVSFKTFVLGPLFTQRRDGDALDV
VLYDAVKQSLQKLLKAFTELYDEYTESITNLRSELLASDSSGSDSSIRISNHADSNKSRI
MDMELDVDEDGQDMTIQTSSGKTPSGGSFSAVKWKLGMVSLISSFFLVLHDKTWDVLSNL
LGKELDFKVYEVILCNLCRRLPSLYSSKLTDLVNLIDNRIGVQVSQKLDCFNILAAIGYL
LDTLLSLDVEKDKHGVVALEEREAKRSLVCLGELVGKVAEFDLLNWFGRVKLIDCICNFV
LLSPEVGQTMIEKLLSMLHDPDYRVRFILSRRIGVLFQTWDGHGELFHDICSNFGIELIF
YSKEKLVTAREVLAAGPQPRQKVETVIITLMQLALHSENIELEAVFMMCAVSSIDPCQRE
LVNAALDNLARKLKYMSRMKYLEELVGSILFCWVACGVSIAALVEIRQLFVLDAEPSYFL
QYCFHWLLPALFIHEDNSNLNWISKIAGQPLTVVVKDHFVPIFSVCMTLHCSKSSGFEKG
AMVLQNSILHFAEISESERDKLIKKNMVSIVSHILSLASCASDPIIPFFSRDTIARAIQT
VVDGFLEMDDHCASISVVDKINIFRPDRVFMFIVEMHYKIAAAIHHRHRCHRLASIEVLI
TVLGHRAALSSTSNYLFNLIGQYIGCHALQDQCCCIISSLLKTFKNNPSKEIVGVLGEQL
QFLVSKLVACCIPLEAEGQRSATVSSLFLSLLLELTVESDPSLYEYIRELEPFPEVDIFE
RIRNFHQDLCRAYSPRDHLLKIVKRSCNLPPRLLSWSLQALQKKLLAGETFQGGKTTKEF
VDDTYWHGDGEIVHAVWTLVRMCASDDSSRIRGLVSDLISRVGIGDPHSVVFHLPGDSNH
MHVHGPISHNGASEIMGSSVSEELLIALLKVLKKYLMDDSVKIVDITSQTLRVSSNDNIN
SGILSTERGQKAILSFDSYERSLIEVHSKGINSELVEKLLMDLEKKFKAEDIFLEKSTTW
VTHGKTFEMWICPVVYSLVGCCTDVILRLCQDVVLLKPEVAELLLPSVVVNLAGRKDIGV
NIQSLISDQVQEHIFVKSNKLIKSIQVWLNALNELRICYVLERSSGPLRKENSKHCRPSN
FSSKSHSSMKPRDSVATLSAVTMSTSSWAKVYWLSIDYLIVARSAITCGSYFTSMMYVEY
WCEEHFHGLTLGNPDFSNLEMLPQHIEILISAITQINEPDSLYGIIQSHTLTSQIITFEH
EGNWNKVLEYYDLQVRSEATAHMDGSSRTLSLTETQSFSQPHLSTSDDEAKWKPYKGLIR
SLQQIGCRHMLDLYCQGLTSGKGQFQQDLEFTELQYEAAWRAGNWDFSLLSAGPIPQSSE
QHTKTHHFNENLHCCLRALQEGDSDEFMRKLKHSKEELVWSVSCASEESTEFIYSTIIKF
QILYHLGIAWEMRWPTSSFERIELQKHKQKMFSDPVIPTMDQLLWLNKDWSSMLTKSQLH
MSLLEPFIAFRRVLLQILNCHDCTMQHLLQSASTLRKGSRFSQAAAALHEFKFLCVRTGE
QGSSAYWLGRLEEAKLLCAQGQREMAIGLGKYILQTNRLDEEASDVYRLVGKWLAETRSS
NSRTIFEKYLKPAVSLAEGDKTADKKSAGRKSQTHFRLAHYADALFRSYEERLNSNEWQA
AMRLRKHKTLELEALMRRLKGSTKGDKIDYSMKIQELQKQLAMDKEEAQKLQDDRDNFLN
LALEGYKRCLVIGDKYDVRVVFRLVSLWFSLSSRQDVVNNLLKTIDEVQTYKFVPLVYQI
ASRMGNIRDGIVPNNFQFALVSLLKKMAIDHPYHTIFQLLGLANGDRIKDKQRSRNSFVV
DLDKKLAAENLLEELSAYHGPVIRQMKQMVEIYIKLAELETKREDTSRKVPLPREIRSVR
QLELVPVVTASFPVDRSCRYCEGSFPYFRGLADSVMVMNGVNAPKVVECLGSDGHKYKQL
AKSGNDDLRQDAVMEQFFGLVNTFLQNHRYTWKRRLVIRTYKVVPFTPSAGVIEWVDGTL
PLGEYLIGSNRNGGAHGRYGIGDWSFLKCREHMSNDKDKRKAFQEVCENFRPVMHYFFLE
RFLQPADWFEKRLAYTRSVAATSMVGYIVGLGDRHTMNLLIDQATAEVVHIDLGVAFEQG
LMLKTPERVPFRLTRDIIDGMGVAGVEGVFRKCCEETLSVMRTNKEALMTIIEVFIHDPL
YKWALSPLKALQRQKETDYDLDTSIEGSQDDYEGNKDAARALLRVKQKLDGYEEGEMRSV
HGQVQQLIQYAIDPERLCQMFPGWGAWM
NT seq 7827 nt   +upstreamnt  +downstreamnt
atggagctgccttcaaatgctcaagtggagatttcattgaggtcatctcttatctcaaaa
gagttcgattgtggttggcaactaatatggagccatcttatgcatggattaccaacattt
agcaacgtaactccagtggtggatgctgcactggcgctccttgggagcattatttcaaat
gtgagtgctgttctacataccagtggcctattagttagtaagagggatttgtcaaacaca
tgtgttgtgcctcatgacgcatgggatcttcgattatttaaaggaatgccttccctgtgt
actctgtacttcattgcctgttatttttctcgtaagggatctcagggtgacctgagggac
attttacatctacggaagtatcttctaagagcaactttgggctctcttagctggaatgaa
ccttccttactaaatgagcgcttggtattattgttaccagcagcagtttatgctctttgt
gctggatgcgaaccttttacccagtgttacaaagaaattcacctgttacagtcttttgtg
gatgttattgaggttgcagatgattggatcaaggctgacgaatatgatcatgaaaagcag
cttgaaaattttgaatgctctattgaagttcttgcaaatattgatttggattcaattatt
caggtttcctcatctcattttcatcaaagtttacgtcttcctcgacaattgagagagtca
cttatgcaagaaatggagtcctgtattttgggacttttagcagatctcaagtttgaaaag
aagcctttgtctgatatcttcttcatatgcgctctactatgcaatttcatttatggatta
tattttacgaggaatggagaagaagtttcatcatttctctcaaaattgggccagtttttg
ttagaattgctgaactatgctgttaatgtaattcaagaaaacaaaaatgactccagatct
cttggatttttgggctttacttccagctttaaccaaaaaagcgctattgttgtttcattt
aaaacctttgttcttgggccccttttcacacaaaggagggatggtgatgccctggatgtt
gtactttatgatgctgtaaagcaatccctgcagaagcttctgaaggcatttactgaactg
tacgatgaatatactgaaagtataactaaccttaggtctgagttattggcatcagattct
tctggatctgattcttctatacggatttctaaccatgcggatagcaataaaagtaggatc
atggacatggagttggatgtagatgaggatggccaagatatgactattcagacatctagt
gggaaaactccttctggtggatctttctctgcagtgaagtggaagttgggtatggtatcg
ctaatctcaagttttttcttggttctgcacgataaaacttgggatgtcctatcgaacctc
ctgggaaaagaacttgactttaaggtgtatgaggttattttgtgcaatctttgtcggcgt
cttccctcattatattcttcaaagctgacagatctggtcaatttaatagataacaggatc
ggagtgcaagttagtcagaagcttgattgttttaacattctagctgctattggttatttg
cttgatacccttctttctttggacgttgaaaaggataaacatggtgtcgtagctttggaa
gaaagagaagctaaacggtccttggtgtgtcttggggagctggttggcaaagttgcagaa
tttgatcttcttaactggtttggtcgtgttaagctaattgactgcatatgcaattttgtt
ttactcagtcctgaggttggccagacaatgattgaaaagctgctttccatgcttcatgat
cctgattatcgagttaggttcattctaagtaggcgcattggtgttctattccagacctgg
gatggccatggagagctctttcatgatatttgttctaactttggcatcgagttaatcttt
tactccaaagaaaaacttgttacagctcgggaagttcttgctgctggtccacagcctcgt
caaaaagttgaaactgtcattattaccctaatgcagcttgctttgcatagtgagaacatc
gaattagaggctgttttcatgatgtgtgcagtttcttccattgatccttgtcagagggaa
ttagtaaatgcagcacttgataatttagcaagaaagctaaagtatatgtcaagaatgaag
tacttggaagaacttgttggatccattttattttgttgggttgcttgtggtgtcagcata
gctgctcttgttgagatacgacaactttttgtattagatgctgaacctagttatttcttg
caatattgtttccattggcttcttccagctttatttattcatgaggacaactctaacctg
aactggatttctaagattgctggccaacctttgactgttgtggttaaggatcatttcgtg
ccaattttttcagtttgtatgacactgcattgcagtaagagctctggttttgagaaggga
gcaatggtgcttcagaactctattttacattttgccgagatctctgagagtgaaagagat
aaactcataaagaaaaatatggtgtctattgtcagtcatattctttctcttgcatcttgt
gcatcagatccaattattccttttttctccagggatactattgcccgtgcaatacaaaca
gttgttgatggatttttggaaatggatgatcactgtgcaagtattagtgttgttgacaag
attaacatctttcgtcctgacagagttttcatgtttattgtagaaatgcattacaaaatt
gcagcagctattcatcacaggcacagatgtcatcggttagcttcaatagaggtgcttata
accgttcttgggcatagagctgcgctttcaagtacatccaattatcttttcaatttgatt
ggccaatatattggttgccatgctttacaagatcagtgctgctgtataatttcttcctta
ctcaaaacttttaaaaacaatccatctaaggaaattgttggtgtgcttggtgagcaactc
cagtttttggtatcaaagttggtggcatgttgcattcctcttgaagctgaagggcagcgt
tctgcaactgtatcatctctatttttgtctttgcttcttgagctaacagtggagtctgat
ccttctctttatgaatatattagagaattggaaccctttcctgaagtagatatctttgaa
cgaataagaaacttccaccaggatttatgccgagcatactctccaagagaccatttattg
aagattgtgaagaggtcttgcaaccttccaccaagattactttcatggagtctacaggca
ctgcagaagaagctacttgcgggggaaacatttcagggagggaagactactaaagaattt
gtggatgacacatattggcatggtgatggggaaattgtgcatgcagtttggacacttgtt
cgcatgtgtgcttcagatgattctagtaggattagaggattggtgtctgatttaatatcc
agggttggcattggagatccacactctgttgtttttcatctccccggagactctaatcat
atgcatgttcatggacccattagtcataatggtgcttctgaaatcatggggtctagcgta
tctgaagagcttctaatagcacttttgaaagttttgaagaaatacttaatggatgattct
gttaaaatagttgatataacgtcacaaacacttcgggtaagcagtaatgacaacataaat
tctggaatactgtcaactgaaaggggtcaaaaagctatattatcatttgattcttatgaa
agatctttgattgaggttcactctaaaggcattaactctgagctggtggaaaagttgtta
atggatctggaaaagaagttcaaagctgaagacatttttttggagaagtctacaacttgg
gtgacgcatggtaaaacttttgagatgtggatatgtccagttgtatactcattggttggc
tgctgcactgatgtgatcctaagactatgtcaggatgttgtgctgctgaaaccggaagtt
gcagagcttcttttgcccagtgttgttgtcaatttagctggaagaaaggatattggtgtt
aacattcagagtttgatttctgaccaggttcaggagcatatatttgtgaagtcgaataag
ttgataaagtctatacaagtttggttgaatgcccttaatgaacttcgaatatgttatgtt
ctggaaagatcttcggggccattaagaaaggaaaattctaagcattgcaggccctctaat
tttagttcaaaatctcattcctcaatgaaacctagagattcagtagctacattgagtgca
gtgaccatgtcaacatcttcatgggccaaggtatattggctttctattgattatctcatt
gtagctaggtcagcaattacttgtggctcttactttacatccatgatgtatgtggagtat
tggtgtgaagaacattttcatggcctcacccttgggaaccctgacttttctaatcttgag
atgttaccgcagcacattgaaattcttatctcagcaatcactcaaatcaatgaaccagac
agcttatatgggattatccagtcacacacattgacctcccaaattattacctttgagcat
gagggaaactggaacaaggttctcgaatattatgacttacaagtgcgatctgaagccaca
gctcacatggatggaagttctagaactctatcattaacagagacccaatctttttctcaa
cctcacctttccacatcagacgatgaggctaagtggaaaccttacaaagggctgattaga
tctttgcagcaaattggttgtaggcatatgctagatttgtattgccaaggattaacttct
gggaagggtcagtttcagcaggatttagagttcacagaattgcagtacgaggctgcttgg
cgtgcgggaaactgggatttctctttactttcagcaggacctattcctcaatcttcagag
caacatactaaaactcatcatttcaatgaaaatttgcactgttgcctaagagcattgcag
gagggagattctgatgaatttatgaggaagttgaagcattcaaaagaggagcttgtttgg
tctgtttcttgtgcaagtgaggaaagcactgagtttatctactcaacaataattaagttt
cagatcctgtatcatcttggtatagcatgggaaatgcgctggccaacatcttcatttgaa
agaattgaacttcagaaacataagcagaaaatgttttcagatcctgtaatccctacaatg
gatcagttgttgtggctgaataaggactggagctcaatgttgacgaaatctcagctgcat
atgagtttgttagaaccatttattgcatttaggcgagttctacttcaaatcttgaattgt
catgactgtacaatgcaacatcttctgcagtctgcatccactcttcgtaagggctctcga
ttttctcaagctgctgcagctttgcatgaatttaagtttctttgtgtgagaactggagaa
caaggttcatctgcatattggcttggaaggcttgaggaagcaaagctgttgtgtgctcaa
ggtcagcgtgaaatggccatcggccttggaaaatacatcttgcagactaatcggttggac
gaagaagcttcagatgtatatcgattggtcgggaagtggttggcggaaactagatctagc
aactcaagaactattttcgagaagtatttaaaacctgcagtgtcacttgctgaaggtgac
aagactgctgacaagaagtcagcaggaagaaaaagtcagactcatttccgccttgcacat
tatgctgatgctctgttcagaagttatgaggaaagacttaattccaatgaatggcaagca
gcaatgcgtttaagaaaacataagacattggaactagaagcccttatgcgacgtctaaaa
ggctcaacaaagggggacaaaattgactactcaatgaaaatacaagagttgcaaaagcaa
cttgcaatggacaaggaagaagctcaaaagttgcaggatgacagagacaattttctcaac
ctagctttggagggctataaacgttgcttggtcataggtgacaaatatgacgtaagagtg
gtgtttcggcttgtatcattgtggttcagcctttcatctagacaagatgttgtcaacaac
ttgcttaaaactattgatgaggttcaaacttataaatttgttccactggtctaccaaatt
gcttcaagaatgggaaacattagagatggaattgtgcctaataattttcagtttgccttg
gtttctcttctgaagaaaatggccattgatcatccctaccatacaatcttccagcttcta
ggtctcgcaaatggtgatcgtatcaaggacaaacagcgtagcagaaactcttttgtcgtg
gatttggataaaaagcttgcagcagaaaatctcttggaagagttatcagcataccatgga
cctgttattagacagatgaaacaaatggtggagatttatatcaagcttgcagaacttgag
accaagagagaggacaccagtagaaaggtaccactgccaagagaaattcgcagtgttcga
cagctggaacttgtacctgtagtgacagctagctttccagttgaccgtagttgtcgatac
tgtgaaggctctttcccatacttcagaggattggcagactcggtcatggtaatgaatggt
gtaaatgctccaaaagtggttgaatgcttgggttctgatggtcataaatacaagcagctc
gcaaaatctgggaatgatgacctaagacaagatgctgttatggaacaattttttggacta
gtaaatactttcctacagaatcaccgctatacatggaaaaggagattagtcatacgtaca
tacaaggttgttcctttcactccaagtgctggtgttattgaatgggtcgatggcacactt
cctcttggggaatatcttataggaagcaataggaatggtggtgcacatggtcgctatgga
atcggagactggtcatttctaaaatgccgagaacacatgtcaaatgacaaagacaagcgc
aaagccttccaggaagtttgtgagaatttcagacctgtcatgcattacttttttctagaa
agatttcttcaaccagctgattggtttgagaaaagactagcttacacgcgaagtgtagca
gctacttcaatggtgggttatattgttggccttggagatagacatactatgaatcttttg
attgatcaggccacagcagaagttgttcacattgatcttggtgttgcttttgaacaaggt
ttaatgctcaagacaccagagagggttccgttcaggctaacaagagacatcatcgatggc
atgggtgttgctggagtggaaggtgttttcagaaaatgttgcgaggaaactctctctgta
atgcgaacaaacaaagaagctctaatgactattatcgaggtttttatccatgatcctctt
tataagtgggctttatcacccctgaaggctttgcagcgtcaaaaggaaacagattacgat
ttggatacaagcatagaaggttcccaagatgattatgaaggtaataaggatgctgcacgt
gctctcctgcgtgtaaaacaaaagttagatggatatgaagaaggtgaaatgagaagtgtc
cacgggcaggttcagcaactgattcaatatgccattgatcctgagagattatgtcagatg
tttcctggatggggagcttggatgtga

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