Gossypium hirsutum (upland cotton): 107892744
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Entry
107892744 CDS
T04793
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107892744
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107892744
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107892744
03036 Chromosome and associated proteins [BR:
ghi03036
]
107892744
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107892744
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107892744
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107892744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
107892744
NCBI-ProteinID:
XP_016673287
UniProt:
A0A1U8I513
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All DBs
Position
A11:complement(106632212..106639850)
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AA seq
539 aa
AA seq
DB search
MEAGVVGDIACLDPELLQLQEMSPLALKSNPEFTQTLFEQWLSLPDTYKLVTQLVSDAKA
RNPLNVPGNASSGSTAASNALPSMFPAGSAPPLSPRSISGSPRITKQRAGLSNLGSPLKV
VSEPVKELIPQFYFKNGRPPPNDLKEQCMFRTSQVFYGHPDGLQLHEFKLVTREICKLPS
FFSPSLFRKIDVNGTGFITRDAFIDYWVNGNMLTMDIATQVYTILKQPDLKYLIQDDFKP
VLRELLATHPGLEFLQSTPEFQERYAETVIYRIYYYINRSQNGRLTLRELKRGNLIDAML
HADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIF
SQVPRKFTSKVEGKMGYEDFVYFILAEEDKSSEPSLEYWFKCIDLDGNGILTRNEMQFFY
EEQLHRMECMAQEPVLFEDILCQIIDMIKPEAESYITLRDLKGSKLSGSVFNILFNLNKF
MAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEDDVEDASNGSAEVWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaggtgttgttggagatattgcgtgtttggatccggagctattgcagctccag
gagatgtctccgttagctctcaaatccaatcctgaattcacgcaaacgcttttcgaacag
tggctttcgcttcccgatacttacaagctggtgacgcaattggttagtgatgcaaaggca
cgcaatcccttgaatgttcctggaaatgcttcctctggaagtacagcagcaagcaatgct
ttaccttccatgtttcctgctggcagtgctcctcccctttcaccaagaagtatatctggt
tcccctcgtataacaaaacaaagggctggtctttcaaacttaggctctccactgaaagta
gttagcgagcctgttaaagagttgatacctcagttttactttaaaaatggtcgtccacct
ccaaatgatctaaaggaacaatgcatgtttcgaaccagtcaggtcttctatggccatcca
gatggactgcagctgcatgaattcaaactagtgaccagggaaatctgtaaactgccttca
tttttctccccatcacttttcagaaaaattgatgttaatggcactggttttattacaaga
gatgcatttattgattattgggtcaatggcaacatgctgaccatggatatagcaacccaa
gtatatacaatattaaagcaacctgatctcaaatacctcattcaggatgacttcaaacct
gtgctccgagaactattggcaactcatccagggctggaattcttacagagtacacctgag
tttcaggaaagatatgctgaaactgtaatatacagaatatattactacataaatagatct
cagaatggtcgcctcactcttagggagttgaaacgcggaaacttgattgatgccatgcta
catgctgatgaggaagaggacattaataaagttttgaggtacttttcatatgagcacttt
tacgtgatatactgcaagttttgggagctggatacggatcatgatttcttgatcgacaag
gagaaccttatcagatatggtaaccatgcgcttacctaccggattgttgataggatattt
tctcaggttccaagaaagtttaccagtaaggttgaaggaaagatggggtatgaagatttt
gtgtactttatccttgcggaggaggacaagtcatcggagcctagccttgagtattggttc
aagtgtatagatttggatggcaatggaattctaacacgtaatgaaatgcaattcttttat
gaggagcagttgcatcgaatggaatgcatggcacaggaacctgtgctctttgaggacatt
ttatgtcagataattgatatgattaagccggaggctgagagctatatcacattgcgtgac
ctgaagggctctaaactttctggaagtgttttcaatatccttttcaatcttaacaaattc
atggcctttgaaactcgtgatccattcctcatacgtcaggagcgtgagaatcctacattg
acagagtgggatcgttttgcacatagagaatatattaggctttcaatggaagatgatgtc
gaagatgcctctaatggaagtgcagaagtttgggatgaatcacttgaggctcccttctaa
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