Gossypium hirsutum (upland cotton): 107892783
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Entry
107892783 CDS
T04793
Name
(RefSeq) polygalacturonase ADPG1-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Module
ghi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107892783
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107892783
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107892783
NCBI-ProteinID:
XP_040933410
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Position
A09:6691936..6698755
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AA seq
277 aa
AA seq
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MATLKIFFFVLLIQCTIFTGSSRQLKKSNINIDSYGDNTVNVISFGAIGDGKKDDSKGFK
RAWDACDSSTPSPTFLVPQGKTFLLQPLTFNRKHCNSNNITFQIDGRIIAPTKPSTWECN
TNCHHWIGLMNFDGLHIQGSGTINGQGDNWWKLSCKDNQKSCQLRKPTGFMIGHSKNVDI
KGLTFEDSPKMHIAFEDSTSIHATQLTIKAPGNSPNTDGIHIQRSTNVSIHNTTIQTGDD
CISIGDGSKYINITNIECGPGHGIRYTLLQSSSFLVL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggctactttgaaaatcttcttctttgtccttttgatccaatgcactatattcactggc
tcttctcgtcagttgaagaagagcaacataaatattgatagctatggtgacaatacagtc
aatgtcattagctttggagctattggagatggaaagaaggatgattctaaggggtttaag
cgtgcatgggatgcttgcgattcatcaactccgtcaccaacctttcttgtacctcaaggg
aagacgtttctgctgcaacctttaactttcaaccgcaaacattgcaactctaataacatt
actttccagattgatgggagaatcatagccccaaccaaaccttctacatgggaatgcaat
acaaattgtcaccattggattggcttgatgaatttcgatggtctccacattcaaggatct
ggtaccatcaatggccagggagataattggtggaaactttcttgcaaagataaccaaaag
tcgtgccaacttcggaaaccaacgggttttatgataggacactccaagaatgtagatatc
aaaggtttaacctttgaagacagtcccaaaatgcacattgcatttgaagactctacttcg
attcatgccactcaacttacaatcaaagctcctggaaacagccccaacactgatggcatt
cacatccaacgttccaccaatgtctctatccacaatacaaccattcaaaccggtgatgat
tgtatatcaattggagacggctctaaatatatcaatattactaacatcgaatgtggtccg
ggtcatggaataaggtatactcttttacaatcatcttcctttcttgttttatga
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