Gossypium hirsutum (upland cotton): 107892793
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Entry
107892793 CDS
T04793
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00531
Glycosaminoglycan degradation
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
107892793
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ghi00536
]
107892793
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
107892793
Glycosaminoglycan binding proteins [BR:
ghi00536
]
Heparan sulfate / Heparin
Enzymes
107892793
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
107892793
NCBI-ProteinID:
XP_016673333
UniProt:
A0A1U8IAN7
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Position
D09:complement(3744141..3746552)
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AA seq
525 aa
AA seq
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MDLKCIFSLAILVSQISLSSTQNVNVVIQGAIPIAETDDNFVCATLDWWPTEKCNYNQCP
WGKAGILNLDLKKKGLINAIKAFNPLRIKIGGSLQDKVVYGVGGVKNCPNFMKNEDSLFG
FSQGCLPMERWDELNNFFNQTGVKVTFGLNDLLKRNRSEIEKGLWVGNWQSQNAGDFMKY
TISKGYKVDSYEFGNQLSGAGMGASVEAEQYGKDIVVLKNLVKELHPDPKTQPKVLGPSG
YYDEKWFNSFLEVSGHDVVDGVTHHIYNLGPGDDPNVIAKIQDPSYLNQVSQTYKGVLNI
VNKFKPQSRAWVSESGEALHGGAKDLSPTFADGFWYLDQLGMASTYNQKVFCRQTLIGGN
YALLNTTTSIPNPDYYGALLWHRLMGSTVLAVTQESNPNLRVYAHCAKKKPGISIIFINL
SKDSSFNVTLSNYEHQGRNLRSTDVVKPNFEFRGSKDREEYHLAALARNIRGQIVLLNDV
PMVPTETFDIPAVEPKLVNASTPIHIVAHSIVYVTIRDFQAPACA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaatgcatattcagcctagcaatccttgtttcccagatatcgctttcgtcg
acgcaaaatgtgaacgttgtgattcagggagcaataccaattgctgaaacagatgataac
tttgtatgcgctacattggattggtggcctactgaaaaatgcaactacaatcaatgtcct
tggggaaaggctggaattttaaatttggatttgaaaaagaagggtctaataaatgcaata
aaagcattcaatcctttaagaatcaaaattggtgggtcgttgcaagataaagtggtgtac
ggagtaggaggagttaagaattgccccaatttcatgaaaaatgaagatagtttatttgga
ttctctcagggctgccttcccatggaaagatgggacgaactcaataattttttcaatcaa
actggagtaaaggttacattcgggttgaatgatcttctcaaaagaaatcggtcagaaatc
gaaaagggtctttgggttggcaattggcaatcgcaaaatgcaggggatttcatgaagtat
actatttccaagggatacaaagttgattcttatgaatttggaaatcaactctccggagct
gggatgggtgcaagcgttgaggctgaacaatatggaaaagacatagtggtacttaagaat
ctagtgaaagaattacacccagatccaaaaactcaaccaaaggttctaggtcctagtggc
tattatgatgagaaatggtttaattccttcctagaagtttcaggacatgatgttgttgat
ggagttacacaccatatctataatcttggaccgggtgatgatccaaacgtgattgccaag
attcaagatccatcttacttaaatcaagtttcccaaacctataaaggtgttttgaatatt
gtcaacaagtttaaaccgcagtcgagagcttgggtttctgaatctggcgaagctcttcac
ggcggtgctaaagatttgtccccaacctttgctgatggattttggtatcttgatcaattg
ggaatggcttcaacctacaatcagaaggtcttctgcaggcaaactctcatcggtggaaat
tatgctttacttaatactacaacatctattcccaatccagattactacggtgcacttcta
tggcaccgacttatgggaagtactgtacttgccgtaactcaagagtctaacccaaatttg
cgtgtatatgctcattgtgcgaagaaaaagcctgggatttctatcatttttattaacttg
tcgaaagatagctcgttcaatgtcaccctttcaaattacgaacaccagggtcgtaatttg
agatccacggatgttgtgaagcctaattttgaatttagaggttccaaggatagagaagag
tatcatttggctgcgctagctagaaatatacgaggtcaaatcgtgttgctgaatgacgtt
ccaatggttccaacagaaacatttgacattccggcggtagagccaaagcttgtcaatgct
tccacacccatccatattgtagctcattccatagtctatgtaaccatcagagactttcaa
gcccctgcttgtgcttaa
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