Gossypium hirsutum (upland cotton): 107892794
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Entry
107892794 CDS
T04793
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00531
Glycosaminoglycan degradation
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
107892794
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ghi00536
]
107892794
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
107892794
Glycosaminoglycan binding proteins [BR:
ghi00536
]
Heparan sulfate / Heparin
Enzymes
107892794
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
107892794
NCBI-ProteinID:
XP_016673334
UniProt:
A0A1U8IC28
LinkDB
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Position
D09:complement(3780108..3796397)
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AA seq
614 aa
AA seq
DB search
MEIGEDMVADGMDKEWKRGKIAQQGKGTEESRMVVEMVISPSQGREPELWRMKEERVCRL
SIERVQARYSSRVNSFFIILGVFIGKGHVQYDVDVLYLSSSRHYRAHKKDVFNGMRMSGA
TPIAETDDNFVCATLDLWPTEKCNYNQCPWGKAGILNLDLKKKGLINAIKAFNPLRIKIG
GSLQVQVVYGVGGVKNCPNFMKNEDSLFGFSQGCLPMERWDELNNFFNQTGVKVTFGLNA
LLGRNRSEIEKGLWVGDWQSQNAGDCMKYTISMGYKVDSYEFGNQLSGAGMGASVEAEQY
GKDIVVLKNLVKELHPDPKTQPKVLGPSGYYDEKWFNSFLEVSGHDVVDGVTHHIYNFVP
GDDPNMIAKIQDPSYLNQVSQIDKGVLNIVNKFKPQSGAWVSESGGALHGGAKDLSPTFA
DGFWYLDQLEMASTYNQKVFCRQTLIGGNYALLNTTTSIPNPDYYGALLWHRLMGSTVRA
VTQESNPNLRVYAHCAKKKPGISIIFINLSKDSSFNFTLSNYEHQGRNLRSTDVVKPKFE
FRGSKDREEYHLAALAGNIQGQIVLLNDVPMVPTETFDIPAVEPKLVNASTPIHITAHSI
VYVTIRDFQAPACA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggtgaggatatggtggccgatggtatggataaggagtggaagagagggaaa
attgctcaacaagggaagggtacagaggagagtagaatggttgttgagatggtcatttca
cccagtcaaggtagggaaccggagttatggagaatgaaagaagagagagtttgcaggttg
agtatagaaagagtgcaagctaggtattcttcaagagtcaattctttcttcatcattctt
ggggtatttataggcaagggtcatgtgcaatatgatgttgatgtgttgtacttgtcatct
agccgtcattacagagctcataagaaggatgtctttaatgggatgaggatgtctggagca
acaccaattgctgaaacagatgataactttgtatgcgctacattggatttgtggcctact
gaaaaatgcaactacaatcaatgtccttggggaaaggctggaattttaaatttggatttg
aaaaagaagggtctaataaatgcaataaaagcattcaatcctttaagaatcaaaattggt
gggtcgttgcaagttcaagtggtgtatggagtaggaggagttaagaattgccccaatttc
atgaaaaatgaagatagtttatttggattctctcagggctgccttcccatggaaagatgg
gacgaactcaataattttttcaatcaaactggagtaaaggttacattcgggttgaatgct
cttctcggaagaaatcggtcagaaatcgaaaagggtctttgggttggcgattggcaatcg
caaaatgcaggggattgcatgaagtatactatttccatgggatacaaagttgattcttat
gaatttggaaatcaactctccggagctgggatgggtgcaagcgttgaggctgaacaatat
ggaaaagacatagtagtacttaagaatctagtgaaagaattacacccagatccaaaaact
caaccaaaggttctaggtcctagtggctattatgatgagaaatggtttaattccttccta
gaagtttcaggacatgatgttgttgatggagttacacaccatatctataattttgtacct
ggtgatgatccaaacatgattgccaagattcaagatccatcttacttaaatcaagtttcc
caaatcgataaaggtgttttgaatattgtcaacaagtttaaaccgcagtcgggagcttgg
gtttctgaatctggcggagctcttcacggtggtgctaaagatttgtccccaacctttgct
gatggattttggtatcttgatcaattggaaatggcttcaacctacaatcaaaaggtcttc
tgcaggcaaactctcatcggtggaaattatgctttacttaatactacaacatcgattccc
aatccagattactacggtgcacttctttggcaccgacttatgggaagtactgtacgtgcc
gtaactcaagagtctaacccaaatttgcgtgtatatgctcattgtgcgaagaaaaagcct
gggatttctatcatttttattaacttgtcgaaagatagctcgttcaatttcaccctttca
aattacgaacatcagggtcgtaatttgagatccacggatgttgtgaagcctaaatttgaa
tttagaggttctaaggatagagaagagtatcatttggctgcgttagctggaaatatacaa
ggacaaatcgtgttgctgaatgacgttccaatggttccaacagaaacatttgacattccg
gcggtggagccaaagcttgtcaatgcttccacacccatccatattacagctcattccata
gtttatgtaaccatcagagactttcaagcccctgcttgtgcttaa
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